Panicum virgatum (switchgrass): 120651556
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Entry
120651556 CDS
T07260
Name
(RefSeq) probable calcium-binding protein CML11
KO
K13448
calcium-binding protein CML
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120651556
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Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
AIF-1
EF-hand_9
EH
SPARC_Ca_bdg
DUF5580_M
FCaBP_EF-hand
Caleosin
EF_EFCAB10_C
DGCcoil
TRAF_BIRC3_bd
Motif
Other DBs
NCBI-GeneID:
120651556
NCBI-ProteinID:
XP_039785008
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All DBs
Position
9K:43736337..43748890
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AA seq
194 aa
AA seq
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MSDATTAAAGAGDHAAAQKPPPAAPSPEATAAAQQQQSRLDDDQLEELREIFRSFDRNAD
GSLTQLELGSLLRSLGLTPSTDQLDALISRADTNSNGLVEFSEFVALVAPDLLVDRSPYS
EDQLRKLFSIFDRDGNGFITAAELAHSMAKLGHALTVKELTGMIKEADTDGDGRINFQEF
SRAITAAAFDNIFS
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgccaccacggccgccgccggagccggagaccacgccgccgcgcaaaagcca
ccaccggccgccccgtcgccagaggccacggcggcggcgcagcagcagcaatcgcggctg
gacgacgaccagctggaggagctgcgggagatcttccgctccttcgaccgcaacgccgac
ggcagcctcacgcagctggagctgggctccctgctccggtccctgggcctcacgcccagc
accgaccagctcgacgcgctcatctcccgcgccgacaccaactccaacggcctcgtcgag
ttctccgagttcgtcgcgctcgtggcccccgacctcctcgtcgaccgatccccgtactcc
gaggaccagctccggaagctcttctccatcttcgaccgcgacggcaacggcttcatcacc
gcggccgagctcgcgcactccatggccaagctcggccacgcgctcaccgtcaaggagctc
acggggatgatcaaggaggccgacaccgacggcgacggccggatcaacttccaggagttc
tcgcgcgccatcaccgccgcggcgttcgacaacatcttctcctga
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