Panicum virgatum (switchgrass): 120651569
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Entry
120651569 CDS
T07260
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120651569
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120651569
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120651569
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120651569
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120651569
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF6011
Motif
Other DBs
NCBI-GeneID:
120651569
NCBI-ProteinID:
XP_039785031
LinkDB
All DBs
Position
9K:complement(44001360..44008417)
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AA seq
877 aa
AA seq
DB search
MSLIQYVTDGGEDALPTEIVKVIESIEVQLPSLAGDQNPCDMVTDVKEDETNNRSLVLPS
IDSESYPTVNFFPKLFLWYIQVLVPLIFSTFSLTIYTIQKQLEETVQPLGYLLVEEQQAM
VVSDNNSKESEKQVPTQLCPSSQQQIPMLGCAGNEENQDVSPMRSSMVLIDNRPLSYDLS
DIDNLSDDSPTRNSNDDSDHSDGFYHYDPICRYHDPYYPFMHRSQRRNFGYLCICNARRN
RWHGDYSCTPDLINPCNPMASRDTEPWRRWTPPEPYHGKKRYDLASVHTGLASRWSSTEP
YCGKKRYSVGAGLSNPHWWTCFLNCILQCMVHTVPLVLKLRKADHPDPCPRASVGFCCFC
SLKLHAAESIRLSGSAFYPESFVNHLKSISSNFESGVQQDAQEFFCDLLEKLDKASLAPR
SSLEEPSTTEEGGIAKEIFGGRLKSQLCCPECNRCSDKSEPFLDLSLEVNMVESLMDALQ
SFTKVELIEDFMCDGCKSRVNMEKHFKVEQAPGVLVIHLKRFTNSGGKILDKVKYPLELD
INSFMSSLDDTPQKYDLYGVVVHHGIYGRGHYVCYIRSSVDDWYEFNDDKICRYSEASVL
DSAAYLLFYVKQGSSPWFSTLLEKEDKFLQDGSVSLADQGTSVMCSPGQDNSGYCLAGPA
EQNGNGPGLLDFSQDIQCNGSGDALSDASDKLAEGCCLGGMSAGTQELSCLTGSGDKNGR
AGGFLEPWEKEDVSPMGSLDSDEMNPSTHGSSEVDPAVTQEGSPLKRENICSLLQLSHKC
DDNCHCMNFSSHEDDETGGCSGAPSMGMGTSETETVESKSNHEFGDSEVGANKGCWEEDS
AGCVSEKRKRPSSADTDGGGGRESKKPLAAANGTRAP
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgattcaatatgtgactgatggtggagaagatgctttgccaactgaaatcgtg
aaggttattgaaagcattgaggttcagctcccttctcttgctggtgaccagaacccatgt
gacatggtcactgatgtgaaggaagatgaaactaacaatcgttcgttagtgttaccttca
attgatagtgaatcctatcctacagtaaacttttttccaaaattatttctgtggtatata
caagttttggttcctctgattttttcaacattctcacttaccatttataccattcagaag
cagctagaggagacagttcagcctctggggtatttactggtggaggagcagcaagccatg
gttgtttctgacaacaatagcaaggaaagtgagaaacaagtaccaacacaactatgtcct
tcaagccaacaacaaatacctatgttgggctgtgctggaaatgaagaaaatcaagatgtt
tctcctatgaggtccagtatggttttaatagacaaccgcccactgtcatatgacttatcg
gacattgataatctttctgacgattcccctacaaggaactctaatgatgatagtgatcac
agtgatggtttttaccattatgatccaatatgtcgttaccatgacccctactatccattt
atgcatagaagccagagaagaaactttggatatttgtgtatttgtaatgctagaagaaac
cgttggcatggtgactattcatgtacccctgatttaataaacccatgcaatcccatggct
tctcgtgatactgaaccttggagacgttggacccctcctgaaccataccatggaaagaaa
agatacgatttggcttctgttcatactgggcttgcgagtcgttggtcctctacagaacca
tattgtgggaagaaaagatacagtgtgggtgctgggctatccaaccctcattggtggaca
tgttttctcaattgcatcctccaatgtatggttcatactgttccccttgtattgaagctc
cggaaagctgatcacccagatccatgtcctcgtgcttctgtcggattctgctgtttctgc
tccctaaaactgcatgctgctgaatctatcaggctttctggaagtgcattctaccctgag
agttttgtaaatcacttgaaatcaatttcgtcaaattttgagagtggagtacagcaagat
gcgcaggagttcttctgcgacttgcttgaaaaattggataaggcctcccttgctcccagg
tcctcgttagaggaaccctctacaactgaagaagggggcattgcaaaagaaatatttgga
ggccgcctaaaaagccagctgtgttgcccagagtgcaaccgttgctcagataaatccgaa
ccttttctggatcttagcttggaagttaacatggtggagagtctgatggatgccttgcaa
tcttttacaaaagttgagttgattgaagacttcatgtgtgatggatgcaagtctcgtgtg
aacatggaaaagcacttcaaggtagagcaggcgcctggagttcttgtaatccatctaaag
aggttcactaattccgggggtaagattttggacaaggtcaagtacccgttagagctggat
ataaactccttcatgagctccttggatgatacaccacaaaagtatgatctatatggagtt
gtagtacaccatggtatatatggcaggggtcactatgtttgttatatccggtcatctgta
gatgattggtatgaattcaatgatgataagatatgcagatattctgaggctagcgttttg
gacagtgcagcatatcttcttttctatgtgaagcaaggttcatccccttggttctccacc
ttgcttgagaaagaagacaagtttctacaggatggttcagtaagcttggcagaccaaggt
accagtgtaatgtgttctcctgggcaagataattcaggttactgcttggctggaccagca
gagcagaatggaaacgggcctggtctgctggacttctcccaggacatacaatgtaatgga
agtggtgatgccttgtcagatgcatcagataagctggcagaaggttgttgcttgggtgga
atgtcagcaggaacacaagaactgagctgccttactggatcaggcgataagaatggccgt
gctggcggatttttggagccatgggagaaggaagatgtcagcccaatgggatcactggac
tcggatgaaatgaacccaagcacacatggatcgtcagaagttgatcctgcagtcacacag
gaaggttcaccgctaaagcgtgagaacatctgcagcttactccaactgtcacataaatgc
gacgacaactgccattgcatgaatttctcctcgcacgaagatgatgaaaccgggggttgt
tctggagcgccatctatggggatgggcacctcagagactgaaacagtagagtccaagtcc
aaccatgaatttggggacagcgaggtcggcgctaataagggctgctgggaagaagacagc
gcagggtgtgtgagtgagaagcggaagaggccctcgtccgcggatacagatggtggtggt
ggccgggaatcgaagaagcccctcgccgcagctaacggaactcgggcgccgtag
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