Panicum virgatum (switchgrass): 120651623
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Entry
120651623 CDS
T07260
Name
(RefSeq) anaphase-promoting complex subunit 5-like isoform X1
KO
K03352
anaphase-promoting complex subunit 5
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120651623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120651623
03036 Chromosome and associated proteins [BR:
pvir03036
]
120651623
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
120651623
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
120651623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC5
Apc5_N
TPR_8
TPR_12
TPR_2
Motif
Other DBs
NCBI-GeneID:
120651623
NCBI-ProteinID:
XP_039785122
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Position
9K:complement(44829853..44845003)
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AA seq
912 aa
AA seq
DB search
MSLFAGVGGGAGSAEPASAGGTGRALLELTPHKIAVCHLVQVFAPPAQAGGDSVLPFPFE
SVAHHNRLGLFLFTLTRSCNDFREPLLEELLRQLKVVDDLTNGWFCEQLTSTLSALNSPD
DLFNFFDKLRGVLTAPEGASAEDIFLDQNSQFGVFLRCCILAFNSMTFEGVCNLLADLVM
YCNSTDASYDLPEDEDFDTEMNNLMDADIGSQAGIFEKYRQGYASESHMGESSSALTRAP
MSLHDFDETNTFKVDDNPICLRSRWQLEAYLNQQADILEKDPSSVPLNSFNATMTRLQTL
APELHRVQFLQYLNALCHDDYVASLDNLHRYFDYSAGMQGLFGRSMSPMQDIVVGKYESA
LLCLGNLHCYFGHPKKALEVFAEAVRVSQMNNDDSCLAYVLGAISNLLSKIGMSNTVGII
SSPYSLGTNIGLGTPLSIQQQLLVLLKRSLKRADILKLPSLLSFDHLSLAKFDLKHVQRP
LVSFGPNASTKLRTCPADVSKNLRLSTRVLTDFGTDALSTSNDNGSFSTSWLRNLSAASD
SWRSSSMKSTKLHNDFDNFYYLAKPSPVPAPVLQLAGSGYLLRATAWEHYGSAPMVRMNA
LVYATCFADAASSSELSLAYVKLIQQLAVFKGYSAAFCALKLAEKKFPSSTSLHIQLLRM
QILHERALHRGHLKVAHQICDEFGVLSSSVCGVDIELKIEASVRHARTLLAAKQYSQAAA
VANSLFSTCYKYNMQVENASVLLLLAEIHRKSDNAVLGLPYALACQSFCKSFNLDLLEAS
ATLTLAELWLALGSSHAKRALSLVHQSLPMILGHGGLELCARAHIVLAKCHLSDPKFSAA
ENLEAVLDPLNQATQDLQVLEYREMAAEAYYLKAMAYNHLGKLDEREEAAACFKEHITGL
ENPHNKEDSLVY
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcgctggggtcggcggcggcgcggggtcggcggaaccggcgtccgcgggc
ggaaccggcagggcgcttctggagctgacgccgcacaagattgcggtgtgccacctcgtg
caggtcttcgcgccgccggcgcaggcggggggcgactccgtgctgcccttcccgttcgag
tctgtcgcccaccacaaccgcctcggcctcttcctcttcacgctcacccggtcgtgcaat
gattttcgggagcctttactggaggaacttctgaggcagctgaaggtggtagacgattta
actaatggttggttctgtgagcagctgacaagtaccctgtcagcgcttaactcgcctgat
gatttgttcaactttttcgataagctccgaggtgtgctcactgcacctgaaggtgcaagt
gccgaggacatatttctggatcaaaatagtcaatttggagttttccttcgctgctgcata
cttgccttcaattcaatgacctttgagggtgtatgcaatcttttggctgatcttgtgatg
tactgtaactccaccgatgcttcatatgacttgccagaagatgaggacttcgatactgaa
atgaacaacttgatggatgcagacataggttctcaagctggtatatttgagaaataccgc
caaggttatgcctctgagagccatatgggggagagctcttcagctctaactcgcgcaccc
atgtcactccatgattttgatgaaactaatacttttaaagtggatgacaacccaatatgt
ctgagatcaaggtggcaattagaggcatatcttaaccaacaagctgatattcttgagaag
gatcccagctcagtgcctttgaattcatttaatgccacaatgacacggcttcagacatta
gctccggagcttcatcgtgtccaattcttgcagtacttgaatgcactttgccatgatgac
tatgttgcttcactggataatcttcaccgctactttgattacagtgcagggatgcaagga
ctttttggtcgttctatgtctccaatgcaagatattgttgttggaaagtatgagagtgcc
ctgctatgcttaggcaacttgcattgttactttggacatcctaagaaagccctagaggta
tttgcagaagcagtgcgtgtttctcaaatgaataatgatgattcatgcctagcctatgta
ttaggagcaatttccaatctattatcaaagataggcatgtcaaacacagttggaataatc
agttcgccatattcactcgggaccaatattggactgggcacaccattatcgattcagcaa
cagttacttgttcttttaaagagatcactcaagagagctgatatattgaaacttcctagc
ttgctatcctttgatcacctttctctggcaaaattcgacctcaagcatgtccaaaggcca
ctagtctcctttggtcccaatgcatctacaaagctcagaacatgtcctgcagatgtctct
aagaatttgagattaagtacccgtgtgttgactgactttggaacagatgctctatctacc
tcaaatgataatggtagttttagcacttcgtggcttaggaatctgtctgctgcttctgac
tcatggcgtagcagttctatgaaatctacaaagttacataatgactttgacaatttctat
tatcttgcaaagccaagtccagttcctgcaccagtattgcaattagctggctcaggatat
ttgctgagagccactgcatgggagcactatgggagtgctccaatggtacgaatgaatgct
ctggtctatgcaacttgctttgctgatgctgcaagttcatcagagttgtcactagcttat
gtcaagctaattcaacaactggcagtgttcaaaggatattctgctgcattctgtgctcta
aagcttgctgaaaagaagttcccatcctcaacaagtttgcacatccagcttcttagaatg
cagatactacatgagcgtgcacttcatcgagggcatctaaaagttgcacaccaaatctgt
gatgagtttggggtgttgtcatcttctgtctgtggagtagacattgagctaaagatagaa
gctagtgtacgacatgctcgcactctacttgctgcaaagcagtatagccaggctgcagct
gtggccaattctcttttctctacgtgctacaagtacaatatgcaagttgagaatgcaagt
gttcttttattacttgctgaaatacatagaaaatctgacaatgcagtccttgggctccct
tatgcattagcctgccaatcattctgcaaatcattcaacttggatcttcttgaagcctca
gccacacttactcttgctgagttgtggctggctcttggatcaagccacgctaagagagcc
ttgagtcttgtccaccagagccttcccatgattcttggtcatggtggacttgagctgtgt
gctcgagctcacattgttttagcaaagtgccatttatctgatccgaaattctcagctgct
gaaaatcttgaagctgtcctggatcctctgaaccaagccacccaagatctgcaagttttg
gagtaccgtgagatggcagcagaggcatactatctgaaggccatggcatacaaccatctc
ggcaagctcgacgagagggaggaagccgcagcttgtttcaaggagcacatcactggcctc
gaaaacccacacaacaaagaggactcgcttgtgtactga
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