Panicum virgatum (switchgrass): 120651912
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Entry
120651912 CDS
T07260
Name
(RefSeq) RHOMBOID-like protein 2
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120651912
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
120651912
Peptidases and inhibitors [BR:
pvir01002
]
Serine peptidases
Family S54: Rhomboid family
120651912
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
Motif
Other DBs
NCBI-GeneID:
120651912
NCBI-ProteinID:
XP_039785481
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All DBs
Position
9K:complement(49008106..49010238)
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AA seq
332 aa
AA seq
DB search
MAAARYDVEQGGRGGEGMYPPPPPPEQMYPQREGEREWVPWFVPVVVAANIALFAVVMYV
NNCPAHAASARRGGACVARGFLHRFAFQPLSENPLLGPSSAALQKLGALVWDKVVHEHQG
WRLLTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYLRIGVIYIVSGVGGSVLSSLFIRN
NISVGASGALFGLLGAMLSELFTNWTIYSNKAAALVTLLIVIAINLAIGILPHVDNFAHI
GGFLTGFLLGFIFLMRPHYGWMQRYVRPSDIKYTTKKYLPYQWVLLAVASVLAVLGFAVG
MGMLFKGVNANDHCQWCHYLSCVPTSRWSCGK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgcgctacgacgtggagcagggcgggaggggcggggaggggatgtacccg
ccgccgccgccgccggagcagatgtacccgcaacgggagggggagagggagtgggtgccc
tggttcgtgccggtcgtcgtggccgccaacatcgcgctcttcgccgtcgtcatgtacgtc
aacaactgccccgcccacgccgcctcggctcgtcgcggcggcgcctgcgtcgcccgcggg
ttcctccaccgtttcgccttccagccgctcagcgagaacccgctcctcggcccatcgtcg
gcggcgctgcagaagctgggagcactcgtgtgggacaaagttgtgcacgagcaccagggc
tggaggctcctgacgtgcatctggctgcacgccggcgttgtccacctgctagccaatatg
ctcagcctcgtgctcatcggactcagactagagcaacaatttggatatctgagaatcggt
gtcatctacattgtttctggcgttggaggcagcgtgctttcatctctgttcatcaggaac
aacatctctgttggcgcttctggagctctctttggactccttggagccatgctgtcggag
ctcttcaccaactggaccatctactcgaacaaggctgcagccctggtgaccctcttaatc
gtcatcgccatcaacctcgccattggcatcctcccgcacgttgataactttgcgcacatt
ggaggattcctcactggtttcctcctggggttcatcttcctgatgcgcccgcattacggt
tggatgcagcgctatgtccggccctcggacatcaagtacaccaccaagaagtacctgccc
tatcaatgggttctgttggccgtagcttcggtcctcgctgtcctcggattcgccgtcggg
atggggatgcttttcaagggagtgaacgcgaacgaccactgccagtggtgccactacctc
agctgcgtcccgacatctagatggagctgtgggaagtga
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