Panicum virgatum (switchgrass): 120651920
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Entry
120651920 CDS
T07260
Name
(RefSeq) probable trehalase isoform X1
KO
K01194
alpha,alpha-trehalase [EC:
3.2.1.28
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120651920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
120651920
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.28 alpha,alpha-trehalase
120651920
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
Enzymes
120651920
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Motif
Pfam:
Trehalase
MGH1-like_GH
Motif
Other DBs
NCBI-GeneID:
120651920
NCBI-ProteinID:
XP_039785488
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Position
9K:49068732..49073553
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AA seq
608 aa
AA seq
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MAAELPHPHRVLLVLVVLLPPLLRPRAVAMAPTPAAGSGDEGAGALLALLLRVQSEALRA
LGPDGFDPKLYVDLPLAADERAAAAALPGQGQAPLSRAELESYLARYFGSAGSDLVAADP
PDFEAHPRGFLPRVESPEARAWALEVHALWKDLARRVAPGVEDRPDRHTLLPLPGGVVVP
GSRFREVYYWDSYWVVRGLMVSKMYDTAKHVVLNLVYLVEKYGFVLNGARSYYTNRSEPP
LLSSMVLEVYRATGDVEFVKRAFQFLLKEHSFWMSEIHNVAIRDNHGQVHNLSRYQARWN
KPRPESATIDEELASSIDSIADKEKLYHQIASTAESGWDFSSRWMRNSTDMTTLATIYII
PVDLNTFIFKMEQDIAAFAKIIGENAISEKFLDASKARHIAIDSILWNSEMEQWLDYWLP
TDGDSQQGVYQWKSDSQNRKIFASNFFPLWLNAYHSGSAKFADTAKSERVMASLQKSGLL
CAAGIATSLTNTSQQWDFPNGWAPVQHLIAEGLLHSGSEEAVKLAEDIATRWVRTNYAAY
KATGAMHEKYDVEACGKSGGGGEYKPQTGFGWSNGVVLSFLEEFGWPKHKEIGCSRQGEV
GLAEAQSG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggagcttccgcatccccaccgcgtcctcctggtcctcgtagtcctcctgcct
ccccttctccgtccccgcgcggtcgcgatggcgccgactcccgccgccgggtccggcgac
gagggcgccggcgcgctgctcgcgctcctgctccgggtgcagtcggaggcgctgcgcgcg
ctggggcccgacggcttcgaccccaagctctacgtcgacctgccgctggcggccgacgag
cgcgccgcggcggccgcgctgcccggccagggccaggctccgctgtcgcgggccgagctc
gagtcctacctcgcgcgctacttcgggtcggccgggtccgacctcgtcgcggcggacccg
ccggacttcgaggcccacccgcgcgggttcctgccccgcgtcgagagccccgaggcgcgg
gcgtgggcgctggaggtgcacgcgctctggaaggacctcgcgcgccgggtggcgcccggc
gtcgaggaccggccggaccggcacacgctgctgccgctgcccggcggggtcgtcgtgccg
ggctccaggttccgggaggtctactactgggactcctactgggtcgtcaggggattaatg
gtgagcaaaatgtacgacacagcaaagcatgttgtgctcaaccttgtatacctggtggaa
aagtatggttttgttctgaacggtgcaagatcctactacactaaccgaagcgaaccacca
cttttaagctcgatggttttggaagtatacagggcaactggtgatgtggagtttgttaag
agagcattccagtttctgctgaaagagcatagcttctggatgtcagagattcataatgta
gctattagggacaatcatggccaggttcataacttgtctcgataccaggcgaggtggaac
aaacctaggccggaaagtgcgacaattgatgaggaacttgcttcgagtatcgattctata
gccgataaggaaaaactttaccaccaaattgcttcaacagcagagtcaggatgggatttt
agctctcgatggatgagaaattctactgacatgacaacgttggcaacaatttacattata
cctgtggacctgaacacattcatatttaagatggagcaggacatagctgcctttgctaaa
atcattggagagaatgcaatctcggaaaagtttttggatgcttcaaaagcacgtcatatt
gcaattgactctattctgtggaactctgagatggagcaatggcttgactactggcttcct
actgatggagattcccagcagggagtctaccaatggaagtctgactcacagaaccgcaaa
atatttgcttccaatttctttccgttgtggttaaatgcttatcattcaggatcagcgaaa
tttgcagacactgcaaaatctgagagagtcatggcaagcctccagaaatctggattactc
tgtgctgcaggaatagcaacttctctaacgaacacaagccaacaatgggatttcccaaat
gggtgggctccggtgcagcatctcatagccgaggggctgttgcattctggatcagaggag
gcggtaaaattagctgaggacattgctacaaggtgggtgagaacaaactacgccgcctac
aaagcaaccggcgcaatgcatgagaagtacgatgtggaggcctgtggaaaatctggaggc
ggtggtgaatacaagccccagactggttttggctggtccaatggtgtggtgttgtcattc
ttggaagaattcgggtggcctaagcacaaggaaataggttgctcacgacagggtgaagtt
ggtctcgccgaagcgcagtctggttag
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