Panicum virgatum (switchgrass): 120651965
Help
Entry
120651965 CDS
T07260
Name
(RefSeq) mechanosensitive ion channel protein 2, chloroplastic-like
KO
K22047
mechanosensitive ion channel protein 1/2/3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120651965
Transporters [BR:
pvir02000
]
Other transporters
Pores ion channels [TC:
1
]
120651965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSL2_3
Msl2-3_C
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-GeneID:
120651965
NCBI-ProteinID:
XP_039785547
LinkDB
All DBs
Position
9K:49682641..49693897
Genome browser
AA seq
663 aa
AA seq
DB search
MAVGLTSHLFQRVPATDIFCQRNKLRSPEMRSSLPLSSTSFPSVADRQDCWGPNVLESNY
RPILYTPHKYRSLGFRTFALPVPLQENPLVKSASVALTRSCDTLLANPATSLVVPAIGII
LFALWGFLPLMRDIRNRFDHGGNWKKSPTYLISSSYLQPLLLWTGATLICRGLDPVVLPT
AASQAVKTRLITFVRSLSAVLAVAYILTSLIQQVQKFLVDMRHPNDTRNMGFDFTMKALY
TGIWIAAVSLFMELLGFNTQKWITAGGFGTVLLTLAGREIFTNFLSSVMINATRPFVVNE
WINAKIDGVEFSGIVEHVGWWSPTIIRGDDREAIYIPNHKFTVSILRNNTQRTHWRIKTY
LAISHMDAGKIGIIVADMRKVLAKNPHIEQQKLHRRVFFEKIDPKNQALMIYISCFVKTS
RFEEYLNVQETVMLDLLRIVGHHKARLATQIRTVQKSYGNAYFDNIPFGEGMYSRVGGRP
LLIDTSARVSDDKAKPQPVSSREEQKVKTNGSAEVKSASPENASLNNSEKHDQKKSVPED
AVVKNSKSDNVMPVTSSSDPVTSISKTGKGKTHEPEATERQDGSVAMANPKKESRPAFED
NIVLGIALEGSKRTLPMEEGNPYLSLSETEPDTVDAAASSKDEIAQSPKLSGQEKADQRN
IDR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcagttggtttgacatcccacctgtttcaaagagtgcctgctactgacatattttgc
caaaggaacaaacttaggagccctgagatgaggagttctcttcccttgtcatccacttcg
tttccttcagttgctgatagacaagactgttggggtcctaatgtgttggagagtaactac
aggcccattctttatacacctcacaaatatagatctctgggctttaggacttttgcattg
ccagttcctctgcaggaaaatcctcttgtcaagagcgcatcagtagcactaactaggtca
tgcgatactttacttgcaaatcctgctacttcacttgtggtccctgcaattggaattatt
ttgtttgctctatgggggtttttgccactaatgagggatattagaaaccgttttgatcat
ggaggcaattggaagaagagccctacatatttaatttcttcatcctaccttcaacctcta
cttctctggacaggagcaacactaatatgcaggggtttggatccagttgtgttgcctaca
gcagcaagccaagctgtgaaaacgcgcctgataactttcgtgagatcattatcagctgtc
ctggccgttgcatatattctcacaagcttgattcagcaggtgcagaagtttcttgtggac
atgcgtcatcccaatgatacaagaaatatgggatttgattttaccatgaaagctctttat
actggtatttggattgctgctgtttctctctttatggagttgctgggtttcaatacccag
aagtggataactgctggaggttttgggacagtactgcttacacttgctggtcgtgagatt
ttcactaacttcctctcgagtgtcatgatcaatgccacacgcccatttgtagtcaatgaa
tggatcaatgcaaagatagatggtgttgaattctctggcattgtcgagcatgttggttgg
tggtctccaacaatcattagaggtgatgatcgagaagctatatacattcctaatcataag
tttacagtttctatattaaggaataacactcagaggacccattggcgtattaagacctat
cttgctataagccacatggatgctggaaaaattgggattattgttgcagacatgaggaaa
gtgttggcgaaaaatccacatatagaacaacagaagctgcatagaagagtattctttgag
aaaattgatccaaaaaatcaagcacttatgatttacatatcctgttttgtgaagacatca
cgttttgaggagtatctcaatgtccaggaaactgttatgttggatcttcttagaatagtt
ggccatcacaaagcaaggcttgctacccaaattcgaacggttcagaagtcatatggcaat
gcatacttcgataacattccttttggagagggcatgtatagtcgtgttggcgggcgtcca
cttctgattgatacatctgcaagggtcagtgatgataaggccaaacctcaaccggtatca
tcacgtgaggagcagaaagtcaagacaaatggttcggcagaggtcaagtctgcttcacct
gaaaacgctagtttaaacaactctgaaaagcatgatcagaaaaaatctgtacctgaagat
gctgtggtgaagaacagcaagagtgataatgtgatgccagtaacatcatcttcagatcct
gttacttcaatttctaaaactggtaaagggaagacacatgaacctgaggccactgaacgc
caggatggttccgtggccatggctaatccgaagaaagaatctagacctgctttcgaagac
aacattgttctgggcattgctcttgagggctccaagaggacactgcctatggaagaagga
aacccttatctatcactatctgagactgagccagacaccgtagatgctgctgcttcatcg
aaagacgagatagcacaaagcccgaaactttcaggtcaagagaaggctgaccagaggaat
atagataggtga
DBGET
integrated database retrieval system
