Panicum virgatum (switchgrass): 120652039
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Entry
120652039 CDS
T07260
Name
(RefSeq) erlin-2-B-like
KO
K23341
erlin
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120652039
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
ERAD complex
120652039
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Gene cluster
GFIT
Motif
Pfam:
Band_7
Tap-RNA_bind
Motif
Other DBs
NCBI-GeneID:
120652039
NCBI-ProteinID:
XP_039785662
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All DBs
Position
9K:50754007..50759777
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AA seq
371 aa
AA seq
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MSDVTADSAQSRRSPPPPSPAPSMARFQQQPSGRQPPPPGADPFAFGVVAFIGICFVLIS
LSVPSSVLHQVPEGHVGVYWRGGALLKTITPPGFHLKLPWITQYEAIQVTLQTDQVRDIP
CGTKGGVMISFDKIEVVNRLRKDYVHETLLNYGVHYDKTWIYDKIHHEINQFCSAHSLQQ
VYIDMFDQIDETMKEAIQRDCTRYAPGIEIISVRVTKPNIPPSIRRNFELMEEERTKALI
AIEKQKVAEKEAETQKKIALSEAEKNAQVSKILMEQKLMEKDSSKRQELIDNEMYLAREK
ALADANYYRILKEAEANRLKLTPEYLELRFIESIANNSKIFFGEKIPNMIMDQRLLKNYL
DDVSRKDHSEL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgtcaccgccgactcggcgcagagccgccgctcgccgcccccgccgtcgccg
gcgccgtcgatggcgcgcttccagcagcagccgagcgggcgccagccgcccccgccgggc
gccgaccccttcgccttcggcgtcgtcgccttcatcggcatctgcttcgtcctaatttca
ctctctgttccatcaagcgttctgcatcaagttcctgaaggacatgttggggtatactgg
agaggaggtgctcttctgaagacaatcactcctccagggtttcatctgaagctcccttgg
atcacccagtatgaggcaatacaggttacacttcaaactgaccaggtcagagatattcct
tgtggaacaaaaggtggtgttatgataagctttgacaagattgaggttgtgaaccgcctc
cgtaaagactatgtgcatgaaacactactcaattatggtgtgcactatgacaagacatgg
atatatgataaaattcatcatgagataaaccagttctgcagtgctcacagtttgcagcaa
gtttacattgacatgtttgatcagattgacgaaacaatgaaagaagctatacaaagagac
tgcacacgctatgctcctggaattgaaatcatcagtgttcgtgttacaaagccaaatata
cctcctagcattaggagaaattttgaacttatggaggaggagcgtacaaaggcactgatt
gctattgagaagcaaaaggtagcagaaaaggaggcagaaacacagaagaagattgcgcta
tctgaagcagagaagaacgcacaggtgagcaagatcctgatggagcagaagctgatggag
aaggacagttccaagaggcaggagctgattgacaacgaaatgtaccttgcacgagagaaa
gcactggcagatgcaaactactacaggatcttgaaggaagctgaggctaataggctcaaa
cttacaccagaatatcttgagctgaggttcattgaatccattgccaataactcgaagatc
ttctttggtgaaaagattccaaacatgatcatggatcaaaggttgcttaagaactacctt
gatgatgtttcgaggaaggaccattccgaattatag
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