Panicum virgatum (switchgrass): 120652155
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Entry
120652155 CDS
T07260
Name
(RefSeq) phospholipase D alpha 1-like isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00564
Glycerophospholipid metabolism
pvir00565
Ether lipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120652155
00565 Ether lipid metabolism
120652155
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120652155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120652155
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
120652155
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
120652155
Endosome - Golgi transport
Others
Others
120652155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLD_C
PLDc
PLDc_2
C2
DUF6209
Motif
Other DBs
NCBI-GeneID:
120652155
NCBI-ProteinID:
XP_039785821
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All DBs
Position
9K:complement(52237584..52248003)
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AA seq
834 aa
AA seq
DB search
MEEPQTTQLLLHGVIDARIVAADLSVTSDGQLQPTKKIQMKRKVFSWIRKLPFCQCKQAL
ENAIGLGMDGKLYATVDIDKARVGRTRMLDPVHSPRWNESFRIYCAHDASNIIFTVKADN
AVGATLIGRAYLPTKDVVAGGKVERWLDIRDEKRQPLRGGDKIHVQLQFTGVAADPEGGW
GTGVGSATYGGVPRTFFQQRRGCRVRLYEDAHIADGFAPRVALAGGGVYEPRRCWADVFE
AINAARRMVYIAGWSVNTGVQLVRDPRRPSSAETLGQLLIRKADEGATVLMLVWDDRTSV
GLGPIKRDGLMATHDEDTAGFFRGTKVRCVLCPRNPDKDRSYVQDVETATMFTHHQKTVI
VDGGGSSGPNAPPGLVSFLGGIDLCDGRYDTQEHPLFRTLGTTHSKDFHQPNFPGASIRK
GGPREPWHDVHCRVEGPAAWDVLDNFEQRWRKQGGGDNLLVALDKGWAPREAAAAADDAE
SWNVQVFRSIDGGAAAGFPEIPDEAAARGLVSGKDHVIERSIQDAYIHAIRRARDFIYIE
NQYFLGSSYAWRQGDGGVAVEAINALHLIPKELSLKIVSKIEAGERFAVYVVVPLWPEGV
PESGSVQAILDWQRRTMEMMYRDITLAIRAKGLRADPRDYLTFFCLGNREAPNPGGEYAP
PERPDPDTDYERAQQARRFMIYVHAKTMIVDDEYVIVGSANINQRSMDGGRDTEIAMGAY
QPSYLATRTRPARGQVHGFRVALWQEHLGQAAAGNLLLRPSRLDCVRWVNEVAQRHWDMF
ASDTFQGDLPGHLMAYPIVVGDEGKITGMTEQFPDTKAKVLGSKSNVLPPILTT
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggaagagccacagacgacgcagctgctgctgcacggggtgatcgacgccaggatcgtg
gcggccgacctgtccgtcacgtcagacggccagctgcagccgaccaagaagattcagatg
aagaggaaggtcttctcatggatcaggaagctgcccttctgccaatgcaagcaggcgctg
gagaacgccatcggcctcggcatggacggcaagctgtacgcgacggtggacatcgacaag
gcgcgcgtcgggcggacgcgcatgctggaccccgttcactccccgcgatggaacgagtcc
ttccgcatctactgcgcgcacgacgccagcaacatcatcttcaccgtcaaggccgacaac
gccgtcggcgccacgctcatcggccgcgcctacctgcccaccaaggacgtcgtcgccggc
gggaaggtggagcggtggctcgacatccgcgacgagaagcggcagcccctgcggggcggg
gacaagatacacgtccagctccagttcacgggcgtcgccgcggacccggagggcggctgg
ggcaccggcgtcggcagcgccacgtacgggggcgtcccgcgcaccttcttccagcagcgc
cgcggctgccgggtgcggctgtacgaggacgcgcacatcgccgacggcttcgcgccgcgc
gtcgcgctcgccggcggcggggtgtacgagccgcgccggtgctgggcggacgtgttcgag
gccatcaacgccgcccggcggatggtgtacatcgccgggtggtccgtgaacaccggcgtc
cagctggtgcgggacccgcggcggccgtcgtcggcggagacgctcggccagctgctcatc
cgcaaggccgacgagggcgccacggtgctgatgctggtgtgggacgaccggacgtcggtg
gggctcggcccgatcaagcgcgacgggctgatggccacgcacgacgaggacacggcgggc
ttcttccgcggcaccaaggtgcgctgcgtgctctgcccgcggaatcccgacaaggaccgg
agctacgtgcaggacgtggagacggccaccatgttcacgcaccaccagaagacggtgatc
gtcgacggcggcggcagctcgggccccaacgcgccgccgggcctcgtgagcttcctcggc
ggcatcgacctgtgcgacgggaggtacgacacgcaggagcacccgctgttccgcacgctg
ggcaccacgcacagcaaggacttccaccagcccaacttccccggcgcgtccatcagaaag
ggcgggcccagggagccgtggcacgacgtccactgccgcgtcgagggcccggcggcgtgg
gacgtgctcgacaacttcgagcagcggtggcggaagcagggcggcggcgacaacctcctg
gtcgcgctggacaaagggtgggcgccgcgcgaggcggcggcggcggccgacgacgccgag
tcctggaacgtgcaggtgttccggtccatcgacggcggcgctgcggcggggttcccggag
atccccgacgaggccgcggcgcgcggcctggtgagcggcaaggaccacgtgatcgagcgc
agcatccaggacgcgtacatccacgccatccgccgcgcgcgggacttcatctacatcgag
aaccagtacttcctggggagctcctacgcgtggcggcagggcgacggcggcgtggcggtg
gaggccatcaacgcgctgcacctcatccccaaggagctgtcgctcaagatcgtgagcaag
atcgaggccggcgagcggttcgccgtgtacgtggtggtgcccctgtggccggagggcgtg
ccggagagcggctccgtgcaggccatcctggactggcagcgccgcaccatggagatgatg
tacagggacatcacgctggccatccgcgccaaggggctccgggccgaccccagggactac
ctcaccttcttctgcctcggcaaccgcgaggcgccgaaccccggcggcgagtatgcgccg
ccggagcggccagaccccgacaccgactacgagagggcgcagcaggccaggcgcttcatg
atctacgtccacgccaagactatgatcgtcgacgacgagtacgtcatcgtggggtcggcg
aacatcaaccagcgctccatggacggcggccgcgacacggagatcgccatgggcgcgtac
cagccgagctacctggcgaccaggacccggccggcgagggggcaggtccacggcttccgg
gtcgcgctgtggcaggagcacctgggccaggcggcggcgggaaacctcctcctccggccg
tcgaggctggattgcgtgcgctgggtgaacgaggtggcgcagcggcactgggacatgttc
gcgagcgacacgttccagggcgacctccctgggcacctcatggcgtacccgatcgttgtg
ggcgacgagggcaagatcacggggatgacagagcagttcccggacaccaaggccaaggta
ctcggcagcaagtccaacgtcctcccgcccatcctcaccacatga
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