Panicum virgatum (switchgrass): 120652160
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Entry
120652160 CDS
T07260
Name
(RefSeq) metacaspase-1-like isoform X1
KO
K22684
metacaspase-1 [EC:3.4.22.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120652160
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C14: caspase family
120652160
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Motif
Pfam:
Peptidase_C14
Dermcidin
Motif
Other DBs
NCBI-GeneID:
120652160
NCBI-ProteinID:
XP_039785828
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Position
9K:52331512..52335433
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AA seq
455 aa
AA seq
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MGFASCHVMHRSKGHGIKEPCCFAYHVGICSCHSCHKRVRHGPPCTMPRRAHISADIFTL
MGNTRPVGMASARAAAAASWCGHCGMSIAAPPSGPGSSSVRCAFCHRLTRVERHRGVTTL
AAPSPPRGAAVPAGLDEIPAGYFPSVSGKKRALLVGVSYRGTAHELRGTVNDVREMRRLL
CGKFGFPGDCILELTENEGDPTRVPTRANLLRAMRWLVEGSGSGDSLVFHFSGHGVQKLD
LNGDEVDGYNEALCPADFERSGKILDDEINEIIVRPLGRGVKLHAVVDTCHSGTILDLPY
LCRLSRTGYWQWENHDRPSGARKRPNGGLAISISGCSDDQKSADASVCLRSPNQEKKTLL
RLGLDDAHPLITPGRYCAGIFRVVVVFDRRHDGQLHQGGGGGAGDDVRAAAERDEGEDPR
RAGEPPPPRKARLLRPLDDPVQHRAGASAVLVGDV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgcatcatgtcatgttatgcacagatcaaagggccatggaataaaggagcct
tgttgctttgcttaccatgttggcatatgctcttgtcactcatgccacaagcgagtgcgc
cacgggccaccatgcacgatgccgcgcagagcgcatatctctgccgacatcttcaccctc
atgggcaacacgaggccggtcggcatggcgagcgcgagggcggcggcggcggcgtcgtgg
tgcggccactgcggcatgagcatcgccgcgccgccgtccgggcccggctcctccagcgtc
cggtgcgcgttctgccaccggctgacgcgcgtcgagcgccaccgcggcgtgacgacgctc
gcggccccctcgccgccgcggggcgccgccgtccccgcggggctcgatgagatcccggcg
ggctacttccccagcgtgagcggcaagaagcgcgcgctcctcgtcggcgtgagctacagg
ggcaccgcgcacgagctcaggggcacggtcaacgacgtcagggagatgcggcgcctcctc
tgcggcaagttcgggttccccggcgactgcatcctggagctcacagagaacgagggggac
ccgacgagggtgccgactcgggcgaacctgctgcgggcgatgcggtggctcgtggagggc
tccggcagcggcgactcgctggtgttccacttctccgggcacggcgtgcagaagctggac
ctgaacggcgacgaggtggacgggtacaacgaggcgctgtgcccggcggacttcgagcgg
agcggcaagatcctggacgacgagatcaacgagatcatcgtccgcccgctgggcaggggc
gtcaagctgcacgccgtcgtcgacacctgccacagcggcaccatcctcgacctcccctac
ctctgccgcctctccagaacggggtactggcagtgggagaatcacgaccggcccagcggc
gcgcggaagcgccccaacggcggcctggccatctccatcagcggctgcagcgacgaccag
aagtccgcagacgccagcgtatgtctccgaagtccgaaccaagaaaaaaaaactctgctc
cgtctcggtttagacgatgcccacccattaattactcccggtcgatactgtgcagggatt
ttccgagtcgtcgtcgtcttcgatcggcgccatgacggacagcttcatcaaggcggtgga
ggcggagccggggacgacgtacgggcggctgctgagcgcgatgagggcgaggatccgcga
cgggcaggggagccgccgcctccccggaaggctcggctccttcgtccgctggatgatccc
gtccagcaccgtgcaggagcctcagctgtgctcgtcggagatgtttga
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