KEGG   Panicum virgatum (switchgrass): 120652160
Entry
120652160         CDS       T07260                                 
Name
(RefSeq) metacaspase-1-like isoform X1
  KO
K22684  metacaspase-1 [EC:3.4.22.-]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pvir01002]
    120652160
Peptidases and inhibitors [BR:pvir01002]
 Cysteine peptidases
  Family C14: caspase family
   120652160
SSDB
Motif
Pfam: Peptidase_C14 Dermcidin
Other DBs
NCBI-GeneID: 120652160
NCBI-ProteinID: XP_039785828
LinkDB
Position
9K:52331512..52335433
AA seq 455 aa
MGFASCHVMHRSKGHGIKEPCCFAYHVGICSCHSCHKRVRHGPPCTMPRRAHISADIFTL
MGNTRPVGMASARAAAAASWCGHCGMSIAAPPSGPGSSSVRCAFCHRLTRVERHRGVTTL
AAPSPPRGAAVPAGLDEIPAGYFPSVSGKKRALLVGVSYRGTAHELRGTVNDVREMRRLL
CGKFGFPGDCILELTENEGDPTRVPTRANLLRAMRWLVEGSGSGDSLVFHFSGHGVQKLD
LNGDEVDGYNEALCPADFERSGKILDDEINEIIVRPLGRGVKLHAVVDTCHSGTILDLPY
LCRLSRTGYWQWENHDRPSGARKRPNGGLAISISGCSDDQKSADASVCLRSPNQEKKTLL
RLGLDDAHPLITPGRYCAGIFRVVVVFDRRHDGQLHQGGGGGAGDDVRAAAERDEGEDPR
RAGEPPPPRKARLLRPLDDPVQHRAGASAVLVGDV
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgggattcgcatcatgtcatgttatgcacagatcaaagggccatggaataaaggagcct
tgttgctttgcttaccatgttggcatatgctcttgtcactcatgccacaagcgagtgcgc
cacgggccaccatgcacgatgccgcgcagagcgcatatctctgccgacatcttcaccctc
atgggcaacacgaggccggtcggcatggcgagcgcgagggcggcggcggcggcgtcgtgg
tgcggccactgcggcatgagcatcgccgcgccgccgtccgggcccggctcctccagcgtc
cggtgcgcgttctgccaccggctgacgcgcgtcgagcgccaccgcggcgtgacgacgctc
gcggccccctcgccgccgcggggcgccgccgtccccgcggggctcgatgagatcccggcg
ggctacttccccagcgtgagcggcaagaagcgcgcgctcctcgtcggcgtgagctacagg
ggcaccgcgcacgagctcaggggcacggtcaacgacgtcagggagatgcggcgcctcctc
tgcggcaagttcgggttccccggcgactgcatcctggagctcacagagaacgagggggac
ccgacgagggtgccgactcgggcgaacctgctgcgggcgatgcggtggctcgtggagggc
tccggcagcggcgactcgctggtgttccacttctccgggcacggcgtgcagaagctggac
ctgaacggcgacgaggtggacgggtacaacgaggcgctgtgcccggcggacttcgagcgg
agcggcaagatcctggacgacgagatcaacgagatcatcgtccgcccgctgggcaggggc
gtcaagctgcacgccgtcgtcgacacctgccacagcggcaccatcctcgacctcccctac
ctctgccgcctctccagaacggggtactggcagtgggagaatcacgaccggcccagcggc
gcgcggaagcgccccaacggcggcctggccatctccatcagcggctgcagcgacgaccag
aagtccgcagacgccagcgtatgtctccgaagtccgaaccaagaaaaaaaaactctgctc
cgtctcggtttagacgatgcccacccattaattactcccggtcgatactgtgcagggatt
ttccgagtcgtcgtcgtcttcgatcggcgccatgacggacagcttcatcaaggcggtgga
ggcggagccggggacgacgtacgggcggctgctgagcgcgatgagggcgaggatccgcga
cgggcaggggagccgccgcctccccggaaggctcggctccttcgtccgctggatgatccc
gtccagcaccgtgcaggagcctcagctgtgctcgtcggagatgtttga

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