Panicum virgatum (switchgrass): 120652163
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Entry
120652163 CDS
T07260
Name
(RefSeq) metacaspase-1-like
KO
K22684
metacaspase-1 [EC:3.4.22.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120652163
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C14: caspase family
120652163
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Motif
Pfam:
Peptidase_C14
Znf_SCAND3
Motif
Other DBs
NCBI-GeneID:
120652163
NCBI-ProteinID:
XP_039785837
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Position
9K:52322308..52327405
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AA seq
399 aa
AA seq
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MGNTRPLGAASSRSTAAAAWCSHCGATGLATPTTSGSGSSVWCAFCHRPTRIERQRQRGA
GDSATPTTVALAVTSPPLTLSARREIPPDYPKIRGRKRALLVGVSYTGTAHELRGTVNDV
KEMRRLLVAQFGFPSGCILELTEKESDPSRVPTRENLLRAMRWLTEGCGPGDSLVFLFCG
HGVQEVDLNGDEVDGYNEALCPVDFERSGVILDDEINETVVRPLGRGVKLHAVMDTCHSG
TILDLPYLHPRPPLPLPPLQNGALAVGESLPWWEGEAPQRRPGHLHQQLQRRPELRGHQR
ISRVGIDRRHDGQLHRGRGGRTRDDLRAAAERDEGEDPRRPWELPPPGRVSIPDRTGLTA
GLRYRFTGPVRPDTGRNRAKGFLNSNSAVILVRNGKPVG
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacgaggccgctcggcgcggcgagctcaaggtcgacggcagcggcggcgtgg
tgcagccactgcggcgccacgggcctcgccacgccgacaacgtccgggtccggctccagc
gtctggtgcgcgttctgccaccggccgacgcgcattgagaggcagcgacagcgcggtgcg
ggcgacagcgccacgcccacgacggtggcgctcgccgtaacctcgccgccgctgacgctc
tccgcgcggcgcgagatcccgccggactaccccaagatacgcggaaggaagcgcgcgctc
ctcgtcggcgtcagctacacgggcaccgcgcacgagctcaggggcacggtcaacgacgtc
aaggagatgcggcgcctcctcgtcgcccagttcgggttcccgagcggctgcatcctggag
ctcaccgagaaggagagtgacccgagcagggtgccgacgcgggagaacctgctgcgggcg
atgcggtggctgacggaggggtgcggccccggcgactcgctggtgttcctcttctgcggg
cacggcgtgcaggaggtggacctgaacggcgacgaggtggacggctacaacgaggcgctg
tgccccgtggacttcgagcggagcggcgtcatcctggacgacgagatcaacgagaccgtc
gtccggccgctgggcaggggcgtcaagctgcacgccgtcatggacacctgccacagcggc
accatcctcgacctcccctacctccatcctcgacctcccctacctctgccgcctctccag
aacggagcactggcagtgggagaatcactaccctggtgggaaggggaagcgccccaacgg
aggcctggccatctccatcagcagctgcagagacgaccagaactccgcggacaccagcgg
atttcccgagtcggaatcgatcggcgccatgatggacagcttcatcgcggccgtggaggc
cgaaccagggacgacctacgggcggctgctgagcgcgatgagggcgaggatccgcgacgg
ccatgggagctgccgcctcccggcagggtttccattcccgaccggaccggcctaaccgcc
gggctccggtaccggtttaccggtccggttaggccggataccggtcggaaccgggcaaaa
ggttttttgaattcaaattcagcagttatactggtacgcaacggtaagccggtcggatag
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