Panicum virgatum (switchgrass): 120652193
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Entry
120652193 CDS
T07260
Name
(RefSeq) 3-ketoacyl-CoA synthase 12-like
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00062
Fatty acid elongation
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04626
Plant-pathogen interaction
Module
pvir_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
120652193
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120652193
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
120652193
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Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
ACP_syn_III
Chal_sti_synt_N
Motif
Other DBs
NCBI-GeneID:
120652193
NCBI-ProteinID:
XP_039785876
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Position
9K:52684862..52687031
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AA seq
461 aa
AA seq
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MELMIALLRVLLVALAAYSAMAAASRRRRSRCYLLDYVCYKPPDDRKFSTETMRAVLDRS
KRLDAPARRFLLRVVLRSGLGEHTYVPRTFFTGREDSPTHQDCLDEMDAFFHGAVAELLS
RAGLGPRDVDVLVVNVSTFHPAPSLASRIVRAYGMRDDVAAYNLAGMGCAGVLVAVDLAR
NALRARSPRPALALVVSAECIAPNCYTGQDRSMMLGHCLFRCGGSAALLTSDPALRGRAK
MELRLTVRTTVAADDDAHSAIVHREDAEGRAGISLSKSLPKVAVRAFTVNIERLAPRILP
ATELARLAAVAACRKLLRRGGAAAAATVNFKAGADHFCLHPGGVAVIDAVKRSMGLDERD
VEPSRMMLHRWGNTSASSVWYVLSYMEAKGRLKVGDRVLMVGFGSGFKCNSCVWEVIGDM
GDKGAWADCIDSYPPESLANPYIDKYGCTNGDDDASVGSNA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgatcgctttgctccgggtgctcctcgtcgcgttggccgcctactcggca
atggcggccgcctcccgtcgccggcgctcgcgttgctacctcctggactacgtctgctac
aaaccgccggatgaccgcaagttctccacggagacgatgcgcgctgtgctggaccgcagc
aagcgcctcgacgcccccgcgcgccgcttcctcctccgcgtcgtcctccgctccggcctc
ggcgagcacacctacgtcccgcgcaccttcttcaccggccgcgaggacagccccacccac
caggactgcctcgacgagatggacgccttcttccacggtgccgtcgcggagctcctctcc
agggcggggctcggcccccgcgacgtcgacgtgctcgtcgtgaacgtcagcacgttccac
ccggcgccgtccctggcgtcccggatcgtgcgcgcctacggcatgcgcgacgacgtcgcc
gcgtacaacctcgccgggatggggtgcgccggcgtgctggtcgccgtggacctcgcccgg
aacgccctgcgcgcgcggtccccgcggccggcgctggcgctggtggtctccgcggagtgc
atcgcgcccaactgttacacggggcaggaccggtccatgatgctgggccactgcctgttc
cgctgcggcggctcggcggcgctgctcaccagcgacccggcgctccgcgggcgcgccaag
atggagctgcgcctcacggtgcgcaccaccgtcgccgccgacgacgacgcgcactcggcc
atcgtgcaccgcgaggacgccgagggccgcgccgggatcagcctcagcaagtccctcccc
aaggtcgccgtccgcgcgttcaccgtgaacatagagcgcctcgcgccgcgcatcctcccg
gccacggagctcgcacggctcgccgccgtcgcggcatgccggaaactgctgcgccgcggg
ggcgccgccgccgccgccacggtcaacttcaaggccggcgccgaccacttctgcctccac
cccggcggcgtcgcggtgatcgacgcggtgaagcggagcatggggctggatgagcgcgac
gtggagccgtccaggatgatgctgcaccggtgggggaacacgtcggcgagcagcgtctgg
tacgtgctctcgtacatggaggccaaggggcggctcaaggtcggggacagggtgctcatg
gtggggttcgggtcggggttcaagtgcaacagctgcgtgtgggaggtgatcggcgacatg
ggcgacaagggtgcctgggccgactgcatcgacagctacccaccggagagcctggccaac
ccgtacatcgacaaatacggctgcaccaacggagacgacgatgcctcggttggttcaaat
gcctga
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