Panicum virgatum (switchgrass): 120652237
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Entry
120652237 CDS
T07260
Name
(RefSeq) myb-related protein Zm1-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120652237
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120652237
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120652237
NCBI-ProteinID:
XP_039785937
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Position
9K:53170504..53172553
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AA seq
323 aa
AA seq
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MAKQSCCHKKKLRRGLWSPEEDEKLMNHIAKYGHGCWSSVPKLAGLERCGKSCRLRWINY
LRPDLKRGTFSQEEEDLIIHLHSLLGNKWSQIAAQLPGRTDNEVKNFWNSYIKKRLRERG
IDPATHQPLAEPAATAAACRAVFGDVVDLIPATAPLQAPLADPMPLDGVKLPLDWPVAGA
PAPPPSRSSCYLQGGCFDMDALQQQQHCGGGGGAFPAPVVPSASSSSTLTSMAEAEHCNN
ADVAGAGLPWLELGPNAVPDAAGHVDSYAGALDELRWSEYFDGAFQAAASQQGALQAAGQ
CVYSGKDDDVAVHFDVHGLSNWC
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcagtcgtgctgccacaagaagaagctgaggagagggctctggtcgcccgag
gaggacgagaagctcatgaaccacattgccaagtacggccacggctgctggagctccgtc
ccgaagctcgcaggccttgagaggtgtggcaagagctgccggctgaggtggataaactac
ctgaggcccgacctcaagcgaggcacattctcgcaggaggaggaggacctcatcatacac
ctccactccttgctgggaaacaagtggtctcagattgcggcgcagctgcccggccggacg
gacaacgaggtcaagaacttctggaactcgtacatcaagaagaggctcagggagcgcggc
atcgacccggccacccaccagccgctcgccgagcccgccgccaccgccgccgcctgccgc
gcggtgttcggggacgtggtcgacctcatcccggcgacggcgccactccaggcgccgctc
gcggacccaatgccgctggacggcgtcaagctcccgctggactggcccgtcgccggcgcc
cccgcgccgccgccatcaaggtcgtcgtgctacctgcaggggggctgcttcgacatggac
gcgctgcagcagcagcagcactgcggcggcggcggcggcgcctttccggcgccggtcgtc
ccgtcggcgtccagctccagcacgctcacctcgatggcagaggccgagcactgcaacaac
gccgacgtcgccggcgccggcctcccgtggctggagctcgggccgaacgccgtgcccgac
gccgccggccacgtcgacagctacgccggcgcgctggacgagctccggtggtcggagtac
ttcgacggcgccttccaggccgccgcgagccagcaaggcgccctgcaggccgcggggcag
tgcgtctacagcggcaaggacgacgacgtcgcggtgcacttcgacgtccatgggcttagc
aactggtgctaa
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