Panicum virgatum (switchgrass): 120652263
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Entry
120652263 CDS
T07260
Name
(RefSeq) heat stress transcription factor B-4d-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120652263
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
120652263
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GFIT
Motif
Pfam:
HSF_DNA-bind
CSTF1_dimer
Motif
Other DBs
NCBI-GeneID:
120652263
NCBI-ProteinID:
XP_039785961
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Position
9K:53448047..53452810
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AA seq
316 aa
AA seq
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MAFLVERCRGGGGEMAAASMDVEMSSHAAKPVAPAPFLTKTFQLVDDPRTDHVVSWGEDG
ATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFKKGARHLL
SEIHRRKPSSCCSQPPPPLQPLPPPHQPYLRSLFSPPQPHPPPPAYYRVQEEDHGGGKED
FLATLSEDNRELRRRNSLLLSELAHMRRLYNDIIYFLQNHVEPAPPPPPSATGCRLVELG
SADNASPPTTTRRPRGDGEEAPVKLFGVRLNDGKKRKAQAAVLLEEENGDGGHCDGVGDG
DGDHNGHDGDDQGSET
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcattcctcgtggagaggtgcagaggtggtggtggagagatggcggcggcgtccatg
gacgtggagatgagctcgcacgccgccaagccggtggcgccggcccccttcctgaccaag
accttccagctggtggacgacccccgcaccgaccacgtcgtgtcgtggggggaggacggc
gccaccttcgttgtctggcggccgccagagttcgccagggacctcctccccaactacttc
aagcacaacaacttctccagcttcgtcaggcagctcaacacctatggcttcaggaagatc
gtggcagacaggtgggagttcgccaacgagttcttcaagaagggcgccaggcacctcctc
tcggagatccaccggaggaagccctcgtcgtgctgctcgcagccgccgccgccgctgcag
ccactccctccgccgcaccagccttacctccgcagcctcttctcgccgccgcagccgcat
ccgcccccgccggcgtattaccgcgtccaggaggaggaccacggcggcggcaaggaggac
ttcctggcgacgctgtcggaggacaaccgggagctgcggcggcgcaactcgctactgctg
tcggagctggcgcacatgaggcggctctacaacgacatcatctacttcctgcagaaccac
gtggagccggcgccgccgccgccgccttcggccaccggctgcaggctggtggagctcggc
tctgctgataacgcgtcgccaccgacgacgacgcggaggccacgcggtgacggcgaggag
gcgccggtgaagctgtttggcgtgcggctgaacgacggcaagaagagaaaggcgcaggcg
gccgtgctgctggaagaagaaaacggcgatggtggccattgtgatggggtcggcgatggc
gacggtgaccacaatggccatgatggcgatgaccaaggaagtgagacgtag
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