KEGG   Panicum virgatum (switchgrass): 120652343
Entry
120652343         CDS       T07260                                 
Name
(RefSeq) SNW/SKI-interacting protein A
  KO
K06063  SNW domain-containing protein 1
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120652343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120652343
Spliceosome [BR:pvir03041]
 Complex B
  Other components
   Prp19-related factors
    120652343
 Complex C
    120652343
SSDB
Motif
Pfam: SKIP_SNW
Other DBs
NCBI-GeneID: 120652343
NCBI-ProteinID: XP_039786064
LinkDB
Position
9K:54254759..54257331
AA seq 606 aa
MATLKDLLPAPKTSASTFYDHSSDPWFKERYGGESAQASAASRPAGAARTIPPYGKRAGF
VPRRPEDFGDGGAFPEIHVAQYPLGMGRRDDKGGSKILALTVDAHGSVAFDAVVKQGENA
GKIVYSKHSDLVPKIATSDSQAPDDDEEEQKQIEESTERTKAALEKVVNVRLSAAQPKNV
PTHDSESKFIKYKPSQQSAAFNSGAKERIIRMSEMAVDPLEPPKFKHKRVPRASGSPPVP
VMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLS
EALYVAEQKAREAVQMRSKVQRELMLKEKERKEQELRALAQKARMERTGGPPAPSAVPAG
GGRGAVDAIDEDMDMEQPPEPREQRRESREEREARIERDRIREERKRERERERRLEAKDA
AMGKKSKITRDRDRDISEKIALGMASTGGAKGGEVMYDQRLFNQDKGMDSGFATDDQYNI
YSKGLFTAQSTMSTLYRPKKDGDSDVYGDADEQLEKVMKTERFKPDKAFTGASERTGKRD
RPVEFDKQEENDPFGLDQFLTEVKKGKKAVEKIGGGGTMKASGGSSMRDDYDGGSGRSRI
NFERGR
NT seq 1821 nt   +upstreamnt  +downstreamnt
atggcgaccctaaaggatctcctcccggcgcccaagacgtcggcgtccaccttctacgac
cacagcagcgacccctggttcaaggagcggtacggcggggagtcggcgcaggcgtcggcc
gcatcgaggcccgcgggcgccgccaggaccatccctccgtacgggaagcgggcggggttc
gtgccgcgccggccggaggactttggggatggcggcgccttcccggagatccatgtcgcg
cagtatcctctcggcatgggccgccgcgacgacaagggcgggtccaagatcctcgcgctc
accgtcgatgcgcacgggagcgtcgccttcgacgccgtcgtcaagcagggcgagaacgcc
ggcaagatcgtctactccaagcacagcgacctcgtgccgaagatcgccacgtccgattcg
caggcgccggacgacgacgaggaggagcagaagcagatcgaggagtccacagagcggacg
aaggctgccttggagaaggtcgtcaacgtccgcctctcagctgctcagcccaagaatgtg
ccgacacatgattctgagtccaagtttattaagtataagccgtcacagcaatcagcggcc
ttcaattcaggtgccaaggagaggatcattcggatgtcggagatggcagtggatcctctt
gagccgccgaagttcaagcacaagcgtgtgccccgggcatctgggtcgccacctgtgccg
gtgatgcactcgccaccgcggccagttacagtgaaggatcagcaggattggaagatccca
ccgtgcatttctaactggaaaaatccaaagggttacacgattccacttgataagaggttg
gcggctgatggaagagggctacaggaggtgcaaattaatgacaactttgcaaagctttct
gaagcattgtatgtggcagaacagaaggcgagggaggcagtacagatgcgctccaaggtc
cagagggaactgatgctgaaggagaaggagagaaaggagcaagaactgagggctcttgca
cagaaggctcgcatggagaggactggtggcccacccgcgccatcagctgtgcctgctggt
ggtggcaggggagcagttgatgctatcgatgaagatatggatatggagcaaccacctgaa
ccgcgtgagcagcgcagggagagtagagaagagagggaagcgaggattgagcgtgataga
atccgtgaggagcgcaaacgtgagagggagagagagaggaggctggaagccaaggatgct
gcaatgggcaagaagagtaagatcacaagagacagggatcgtgacatcagtgagaagatt
gctctgggtatggcaagcactggtggtgccaaaggtggtgaggtcatgtatgaccagcgg
ctgttcaaccaggacaaggggatggactccgggtttgccacggatgatcagtacaacatc
tactctaaggggctcttcacagcgcagtctacgatgtctacattgtacagacctaagaag
gacggtgattctgatgtgtatggtgatgcggatgaacagttggagaaggttatgaagact
gagaggttcaagcctgacaaggcttttactggtgcttctgagaggactggcaagcgagac
aggcctgtggagttcgataagcaggaggagaatgatcccttcggtctggatcagttcttg
actgaggtgaagaagggaaagaaagctgtggagaaaatcggaggcggaggcaccatgaag
gcgagtggtgggtcctcaatgagggatgattatgatggaggatctgggaggtcccgcatt
aattttgaaagggggcgttga

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