Panicum virgatum (switchgrass): 120652348
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Entry
120652348 CDS
T07260
Name
(RefSeq) nuclear/nucleolar GTPase 2-like
KO
K14537
nuclear GTP-binding protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120652348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120652348
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
GTPases
120652348
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NGP1NT
MMR_HSR1
FeoB_N
RsgA_GTPase
Glyco_transf_5
Motif
Other DBs
NCBI-GeneID:
120652348
NCBI-ProteinID:
XP_039786071
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All DBs
Position
9K:complement(54309741..54313923)
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AA seq
541 aa
AA seq
DB search
MAKKKEKAVNVSGKPRHSNDVNRPNDKKGAGGGAGGGARSAATVRRLKMYKTRPKRDLSG
KVLRNEFQSKELPNTRIEPDRRWFGNTRVVGQTQLALFRDELKNRLSDNFSVILKERKLP
LSLLQDHQKQARAHLLDVEPFEHAFGPKGKRKRPKLTALDYESLLKKADDSQDAFEQKYA
SSTLPREEEEDGLRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRCYH
LEKHLKENCKHKHLVFLLNKCDLIPAWATKGWLRTLSKDYPTLAFHASINKSFGKGSLLS
VLRQFARLKNDKQAISVGFVGYPNVGKSSVINTLRSKSVCKVAPIPGETKVWQYITLTKK
IFLIDCPGVVYQNNDSETDIVLKGVVRVTNLEDAAEHIGEVLRRVKKEHLQRAYKIQDWT
DDNDFLLQLCRTTGKLLKGGEPDLTTAAKMVLHDWQRGKIPFFVPPLQQSDDGASEIAEP
VEKTEEDGVSSDRTAAAMKAIARIISSQQNLNVPCHKEHDADNEDIESEDNEEIELPEQS
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagaaggagaaggcggtgaacgtgtcgggcaagccgcggcactcgaacgac
gtcaaccgccccaatgacaagaagggcgccggcggcggcgccggcggcggggcccggtcc
gcggcgaccgtccggcggctgaagatgtacaagacgcggcccaagagggacctctccggg
aaggtgctcaggaacgagttccagtccaaggagctccccaacacccgcatcgagcccgac
cgccggtggttcggcaacacccgggttgtgggccaaacacagcttgcattgtttcgggat
gaactcaagaatcgtctttctgacaacttcagtgtcatcctgaaagaacggaagctacca
ctatcacttctgcaggatcatcaaaagcaagcgagagcacatttgcttgatgttgaacct
tttgagcatgcttttgggccaaagggcaagaggaaacgcccgaaactaactgctcttgac
tatgaatctttgctgaagaaagctgatgattcccaagatgcatttgagcaaaagtatgct
tcctcaacgttgccaagggaggaagaagaagatggcttaagggatctagtgaggcacacg
atgtttgagaagggacagagcaaaagaatctggggtgaattgtacaaagttattgactct
tcagatgttgttgtgcaggtgttggatgctagggatccaatgggcactcgatgctatcat
ctagagaaacatctaaaggagaattgcaaacacaaacacttggtattcttactaaataag
tgcgatctaatccctgcttgggctacaaaaggatggttaaggaccctgtcaaaggactat
cccaccctagcattccatgctagcatcaacaagtcatttggcaaaggatctcttctgtca
gtattgaggcagtttgctcgtttgaagaatgacaaacaagctatatctgttggatttgtt
gggtaccccaatgttgggaagtcatctgttattaacacattacggtcgaagagtgtttgc
aaggtcgcgcccattcctggagagacaaaagtgtggcaatacatcactctcactaaaaag
atctttttgatcgattgtcctggcgttgtgtatcaaaataatgattcagaaactgatata
gttctaaagggtgtggtacgagtgacaaatttagaggatgctgctgagcacattggtgaa
gttctgaggcgtgttaaaaaggagcatctgcaaagagcatacaaaattcaagattggact
gatgataacgattttcttctccagctgtgcaggactactggaaaacttctcaagggtggg
gagcctgacctgacaacggccgccaagatggttcttcatgactggcagaggggtaaaatt
cccttttttgtaccccctctgcagcagagtgatgatggtgcatctgaaattgctgagcct
gttgagaaaaccgaagaggatggagtaagcagcgaccggactgctgccgccatgaaagcc
attgcacggataatttcgtctcagcagaacctgaatgtaccttgccataaggaacatgat
gcagacaatgaagacattgaaagtgaagataacgaggagatcgaacttccagagcaatca
gagtaa
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