Panicum virgatum (switchgrass): 120652361
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Entry
120652361 CDS
T07260
Name
(RefSeq) probable nucleolar protein 5-2
KO
K14565
nucleolar protein 58
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120652361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120652361
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
120652361
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Gene cluster
GFIT
Motif
Pfam:
Nop
NOP5NT
Motif
Other DBs
NCBI-GeneID:
120652361
NCBI-ProteinID:
XP_039786090
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Position
9K:54417419..54421338
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AA seq
568 aa
AA seq
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MLVLFETPAGFALFKVLDEGKLDKVEDLWKEFTTSDSARRVVELKAFNKFENTSDALSAA
TLIIDSKPSKGLRKFLQKHCEGETLAVADSKLGNAIKEKLKIDCVHNGAVMELMRGLRNQ
LTELITGLGAQDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGLLDDLDKELNTYAMR
VREWYGWHFPELTKIVTDNIQYAKIVKMMGNRANAVKIDFSEILSDEDVETQLKEAAVIS
MGTEVSDLDLLNIRELCDQVLALSEYRAQLYEYLKSRMNTIAPNLTALVGELVGARLIAH
GGSLLNLAKQPGSTIQILGAEKALFRALKTKHSTPKYGLIYHASLIGKASQKHKGKISRS
LAAKTALAIRYDALGDGEDNSIGTESRLKLETRLQVLEKTEFGKSAGSAKGKPKIEAYEK
DRKKGAGALITPAKAYNPAADVFLGKFTEETPKKSELASKKRKHHDVETAPPTEPAAEAI
QEDGDQEKKKKKKKYKETEETPVADADGEKKKKKKSKENEEEPAVSTAEGRKKKKKKSDA
DGEDVSMQAEESGKKEKKKKKKKHADDE
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgctattcgagacccccgcggggttcgccctcttcaaggtgctggatgagggg
aagctcgacaaggtcgaggatctatggaaggagttcacaacatcggactcggcaagaagg
gtggttgagctgaaggctttcaacaagtttgagaacacatctgacgctctctctgctgca
accctaattattgatagcaagcctagcaagggtctgcgcaagttcttgcagaagcactgc
gagggtgaaacattagctgttgctgattctaagcttggaaatgctataaaggaaaagctg
aaaattgactgcgttcacaacggtgctgtgatggagctgatgagagggctgagaaatcag
ctcactgagcttataactgggctgggtgcacaagaccttggtccgatgagcttgggactg
tcacacagcctgtctaggtataagctgaagttcagtcctgagaaggttgataccatgatc
attcaggccattggcttattggatgatcttgacaaagagcttaacacttatgctatgagg
gttcgtgaatggtatggttggcactttccagagctcactaaaatagtcacagataatata
cagtatgcaaaaattgtgaagatgatgggcaacagagctaatgcagtcaaaattgatttc
tctgagatactgtcagatgaagatgtagaaacacagctaaaggaggcagcagtaatatcc
atgggaacagaagttagtgaccttgacctgttaaatatcagagagctatgcgatcaagta
ttggctctttctgagtacagagcgcagctgtacgagtatttaaaaagcaggatgaacact
attgcaccaaatctgaccgcactcgtgggtgaattagttggtgctcgccttattgcacat
ggtggcagtttgctaaatttagccaagcagcctggcagcacaattcagatacttggtgca
gagaaggctttattcagagctctaaagacgaagcattctacacctaagtatggcctcatc
taccatgcatccttaattggcaaggcatctcaaaagcacaagggaaagatctctcgttct
cttgctgcgaaaactgctcttgccatccgatatgatgcccttggtgatggtgaggacaac
tccattggcacggagagtcggctcaagcttgagacacggcttcaagttcttgagaaaaca
gaatttgggaaatctgctggttccgcaaagggaaagcccaagatagaagcgtatgaaaag
gacaggaagaagggtgctggggctttaattactcctgctaaggcatacaaccctgctgct
gatgtttttcttggaaaattcactgaagaaacacctaagaagtctgaattggcttcaaag
aagaggaaacatcatgatgtggagactgcaccgccaacagagcctgccgctgaagcaatc
caggaggatggtgaccaggagaagaagaaaaagaagaagaagtataaggaaactgaggag
actcctgtggctgatgctgatggtgagaagaaaaagaaaaagaagtctaaggagaacgag
gaggagcctgctgtgtcaactgctgaaggcaggaagaagaagaagaagaaatctgatgca
gacggtgaggatgtttcaatgcaagctgaggagtccggtaagaaagaaaagaagaaaaag
aagaaaaagcacgctgatgatgagtga
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