Panicum virgatum (switchgrass): 120652397
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Entry
120652397 CDS
T07260
Name
(RefSeq) putative ubiquitin-like-specific protease 1B
KO
K08592
sentrin-specific protease 1 [EC:
3.4.22.68
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120652397
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120652397
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.68 Ulp1 peptidase
120652397
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C48: Ulp1 endopeptidase family
120652397
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
120652397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
Chal_sti_synt_C
Motif
Other DBs
NCBI-GeneID:
120652397
NCBI-ProteinID:
XP_039786141
LinkDB
All DBs
Position
9K:54843684..54854370
Genome browser
AA seq
417 aa
AA seq
DB search
MALAPSSWPRTPPALSPNRRKRRPDASPPPHHFHGPQTHSRLSQRLRRWCPPPPQARSVA
FDMLNFLSGLLGGLRPKDNGLGLLKSWTAQSRDLTVVTDEENGTAHRLLDRRVKDSRKAT
LEAVKSQPRQKGEPFYKKAHKEARRNDGRLEEIGIEVKLYEEKHAEIRKLDKAVKEDLSG
LFKRLTEEEENEVHDCFDAGGPSSKVLVLHQPSNIEVSKEKFQCLRRGRWLNDEVINLYL
ELLKEREKREPKRFLKCHFFNTFFYKKLACGKNGYDYKSVKRWTTHRKLGYELIECDKIF
VPVHKDVHWCLAIINMKENTFQYLDSLGGTDHNVLNMLARYIAEEVKDKSNKVIDTSSWH
EEIVDDIPLQQNGWDCGMFMLKYIDFHSRGLNLSFSQKDMEYFRKRTAKEILKLRAD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggccctagccccctcctcctggccaagaacgccgcccgccctttcccccaaccgccgc
aagcgccgccccgacgcctctcccccgccccatcacttccacggcccgcaaacccacagc
cgcctaagtcagcgcctccgccgctggtgcccgcccccgccgcaggcgaggtccgtcgca
ttcgacatgctcaacttcctctccggcctcctcggagggttgcggcccaaggacaatggg
ctggggctgttaaagagctggactgcgcagtcgcgggatctcacggtggttacggatgag
gagaacggaacggcgcatcgtttgctggaccggagggttaaggattcgaggaaggctacg
ctggaggcggtgaagagccagccgcggcagaagggcgagcccttctacaagaaggcgcac
aaggaggcgagacggaacgacggtaggttggaggagatagggatcgaggtgaagctctat
gaggaaaagcatgccgagatacggaagttagacaaggctgtcaaggaggatttgtctgga
ctatttaagcgtctcactgaggaggaggaaaatgaagttcatgactgtttcgatgctgga
ggtccaagtagcaaagtccttgtgttgcatcaaccatcgaacattgaggttagcaaagag
aaattccagtgcttgagacgcggtcgatggttaaatgatgaggttattaacctataccta
gaattgttaaaggagagggaaaaaagagagccgaaaaggtttttgaaatgccatttcttt
aatacattcttttataagaagcttgcttgcgggaaaaatggttatgactacaaatctgtt
aaaaggtggactacccataggaagttgggatatgagctcattgaatgtgataaaatcttt
gtccctgtgcataaagatgtgcattggtgtttagcaattataaacatgaaggaaaatacg
tttcagtatcttgattctctgggcggcacggatcataatgtactaaacatgctggctcga
tatattgcagaggaagtcaaggataaaagtaacaaagtaattgacactagttcgtggcat
gaagagatagttgatgatattcctttgcaacagaatgggtgggactgtggtatgtttatg
ctcaagtacattgatttccacagcagaggattgaacctatcttttagtcagaaagacatg
gaatattttaggaagagaacagcgaaggaaatcttaaaattaagagctgactga
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