Panicum virgatum (switchgrass): 120652426
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Entry
120652426 CDS
T07260
Name
(RefSeq) fumarate hydratase 1, mitochondrial-like
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir00620
Pyruvate metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120652426
00620 Pyruvate metabolism
120652426
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
120652426
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
120652426
NCBI-ProteinID:
XP_039786175
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All DBs
Position
9K:complement(55094267..55100343)
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AA seq
496 aa
AA seq
DB search
MAMALRRLAGLPGSPSAAAAALLFRPALTRPISTGFREERDTFGPIQVPNDKLWGAQTQR
SLQNFDIGGERERMPVPIIRAFGVLKKCAAKVNMEYGLDPTIGKAIMQAAEEVAEGKLDD
HFPLVIWQTGSGTQSNMNANEVIANRAAEILGHKRGEKFVHPNDHVNRSQSSNDTFPTVM
HIAAAVEINSKFIPSLQQLHDSLHSKSVEFNDIIKIGRTHTQDATPLTLGQEFSGYTTQV
KYGIDRINCTLPRMYQLAQGGTAVGTGLNTKKGFDVKIAAAVAEETSLPFVTAENKFEAL
AAHDAFVESSGAVNTISASLMKIANDIRLLGSGPRCGLGELILPENEPGSSIMPGKVNPT
QCEALTMVCAQVMGNHVGVTVGGANGHFELNVFKPMIAAGLLRSLRLLGDASVSFEKNCV
RGIQANHKRISQLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKKAALDLGVLTED
EFHELVVPEKMIGPSD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggctctgcgccgcctcgcgggcttgcccggctccccgtcggccgccgcggca
gcgctgctcttccgcccggcgctgacccgcccgatctccaccggcttccgcgaggagcgc
gacaccttcggccccatccaggtccccaacgacaagctgtggggtgcgcagacgcagagg
tcgctgcagaacttcgacattggcggcgagcgcgagcggatgcccgtgcccatcatccgc
gcctttggtgtcctcaaaaagtgcgctgctaaggtgaatatggagtatggccttgatcca
acaataggcaaggcaataatgcaggcagctgaggaggtcgctgagggaaagctggatgat
cacttcccacttgttatctggcaaactggtagtggcacacaaagcaacatgaatgccaat
gaggtaattgcaaatagggcagctgagattcttggacacaagcgtggtgagaagtttgtg
caccctaatgaccacgtgaataggtcacaatcctccaatgatacatttcccactgttatg
catatagcagctgctgtcgagatcaattcaaaatttatcccaagtttgcaacagttgcat
gattcacttcactcaaagtctgttgagtttaatgacataatcaaaatcggacgtacacat
acccaagatgccaccccgttaactcttggccaggagttcagtggttacacaacacaggtc
aaatatggaattgaccgaattaattgtacattacctcggatgtaccagcttgctcaaggt
ggaactgcagttggaactgggttgaacactaagaaaggatttgatgtcaaaattgccgct
gcagtggctgaggaaacaagtctaccctttgtgacagcagagaacaagttcgaagctttg
gcagcacatgatgcttttgttgagagcagtggtgccgtaaacacgatatccgcgtccctt
atgaaaatagcaaacgacatacgcttgctgggaagtggccctcgctgtggacttggtgaa
ctaatcctgccagaaaatgagcctgggagtagcattatgcctggaaaagttaatccaaca
cagtgtgaggctctgaccatggtttgcgctcaggttatgggtaatcatgttggtgttaca
gttggtggtgcgaatgggcattttgaactgaatgttttcaagccaatgattgcagccggg
ttacttcgttcattgagattgttgggggatgcttctgtgtcctttgagaaaaattgtgtc
aggggaattcaagcaaaccataagagaatttcacagcttttgcatgagtctctgatgttg
gtgacatctttgaaccctaaaattggctatgacaatgctgcagctgtagctaagaaagct
cacaaagaaggaaccacattaaagaaagctgcactagaccttggtgtcttaacggaagac
gaattccatgagcttgtcgttccagagaaaatgattggcccttctgattga
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