Panicum virgatum (switchgrass): 120652466
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Entry
120652466 CDS
T07260
Name
(RefSeq) ABC transporter I family member 6, chloroplastic-like
KO
K09013
Fe-S cluster assembly ATP-binding protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120652466
Transporters [BR:
pvir02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Orphan ABC ATPase
120652466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_25
AAA_15
AAA_18
TMEM171
AAA_13
DUF87
Motif
Other DBs
NCBI-GeneID:
120652466
NCBI-ProteinID:
XP_039786240
LinkDB
All DBs
Position
9K:55503464..55507761
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AA seq
304 aa
AA seq
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MAPPLAAVSSSSPLFSPSSSRPLIRRHAPPSYVSLRTRGRSQPAAAAAAESSGSPLLEVR
GLTASVKETGHQILAGVDLTIREGEIHAIMGKNGSGKSTLTKVLVGHPHYEVTGGTILFK
GEDLVDMEPEERSLAGLFMSFQAPIEIPGVSNFDFLLMAVNARREKSDLPALGPLEFYSV
VSSKVDALKMDPKFLDRNVNEGFSGGERKRNEILQLSVIGADLALLDEIDSGLDVDAIED
VAIAVNGLLTPQNSVLMITHYQRLLDLIKPSYVHIMENGKIIKTGDSSIATQINEGGFKS
IALV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcccctcgccgccgtatcctcctcgtcgcccctcttctcgccctcctcatcc
cgccccctcatccgccgccatgcgcctccgagctatgtctccttgcggacgcgtggccgt
tcgcagcccgcggcggcggcggcggccgagtcctccggcagcccgcttctcgaggtgcga
ggtctcaccgcatccgtgaaggagaccgggcatcagatcctcgccggcgtcgacctcacc
atccgcgagggcgagattcatgcgatcatggggaagaacggctccggcaagagcaccctc
acaaaggttcttgttggccatccacattatgaggtaactggtggcaccattctcttcaag
ggtgaggacttggttgacatggagccagaggaaagatctctcgcaggcctttttatgagt
ttccaagcacctattgagattcctggcgtgagcaattttgattttctgctcatggcagtc
aatgctcgcagagaaaagagtgatctaccagcattgggaccccttgagttttattcggtt
gtatcatccaaagttgatgccttgaagatggacccgaagttccttgatcgcaatgtgaat
gaaggttttagtggtggtgaaaggaagcgcaatgagatactgcaactttcagtcattgga
gcagatttagctcttcttgatgagatagattcaggattagatgttgatgcaattgaagat
gtagctattgcggtgaatgggcttttgacaccccaaaactctgttctgatgattacgcat
taccaacgtcttttggatctcatcaaacccagctatgttcatatcatggaaaatggcaag
ataatcaagactggtgacagttctattgccactcaaattaatgaaggtggcttcaaatca
atcgcccttgtatag
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