Panicum virgatum (switchgrass): 120652485
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Entry
120652485 CDS
T07260
Name
(RefSeq) endoglucanase 9
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120652485
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120652485
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
Motif
Other DBs
NCBI-GeneID:
120652485
NCBI-ProteinID:
XP_039786262
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Position
9K:55703552..55707668
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AA seq
619 aa
AA seq
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MSMYGRDPWGGPLEICHDSATDDDRSRNLDIDRGALSRTLDETQQSWLLAGPGDQGRRKK
KYVDIGCLVVSRKFFVWTLGVLLAAAVFAGVVAGIAKAIPRRHRPPPQPDDYTVALHKAL
MFFNAQRSGKLPKHNNVPWRGNSCMKDGLSDPAVRRSLVGGYYDGGDAVKFNFPAAFSMT
LLSWSVIEYSAKYEAVGELGHVRDIIKWGADYFLKTFNSTADSIDRVVAQVGSAATSPGS
TQPNDHYCWMRPEDIDYPRPVVECHACSDLAAEMAAALAAASIVFKDNKAYSQKLVHGAT
TLFQFARNLRGRYSAGGSDAAKLYNSTSYWDEFVWGSSWMYLATGNSSYLTLATHPKLAK
HAGAFWGGPDYGVFSWDNKLTGAQVLLSRLRLFLSPGYPYEEMLRAFHNQTSIIMCSYLP
IFKSFNRTKGGLIQLNHGKPHPLQYVVNAAFLASVFSDYLEAADTPGWYCGPHFYSIEVL
RSFARTQIEYILGKNPLKMSYVVGFGKHYPKHVHHRGASIPKNAVHYGCKGGWKWRDTKK
PNPNIIVGAMVAGPDRHDGFKDARKNYNYTEATLAGNAGLVAALVALSGEGHGVDKNTMF
SAVPPMFPSPPPPPGPWKP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgtacgggagggacccgtggggcgggccgctggagatatgccacgactcggcc
acggacgacgaccgcagccggaacctggacatcgaccgcggcgcgctgtcgcggacgctc
gacgagacgcagcagagctggctgctggcggggcccggggaccagggccgcaggaagaag
aagtacgtggacatcggctgcctcgtcgtcagccgcaagttcttcgtctggacgctcggg
gtgctcctcgccgccgccgtcttcgcgggggtcgtggccgggatcgccaaggccataccc
aggcgacaccgcccgccgccgcagcccgacgactacaccgtcgcgctgcacaaggcgctc
atgttcttcaacgcgcagagatctggcaagcttccgaagcacaacaatgtaccatggcgt
ggcaactcttgcatgaaggacggactctctgacccggcagtccggcgaagcctggttggc
gggtactatgacggtggcgacgccgtcaagttcaacttcccagctgcattctccatgacc
ctcctcagctggagtgtcattgagtacagtgccaagtatgaagctgttggggaacttggc
catgtccgtgacattatcaagtggggagcagactacttcttgaagacctttaactccaca
gccgatagcattgatcgtgtcgttgcgcaggtgggaagtgctgcaacgtcgcctggttct
acacaacccaatgatcactattgttggatgaggccagaggacattgactacccacgtcca
gtggtcgagtgccacgcttgttcggatcttgctgctgaaatggctgcagcattagctgca
gcttctattgtattcaaggacaataaggcttactcacagaaacttgtacatggtgctacc
actctcttccaatttgcaaggaatctgcgtgggaggtatagtgcaggcggttcagatgct
gcaaagttatacaattcaaccagttactgggatgagtttgtgtggggtagttcatggatg
taccttgcgactggcaattcgtcatacttgactctagccacacaccccaagcttgcgaag
catgctggtgctttctggggtggtccggattatggtgtcttcagttgggataataagctc
accggtgcacaggttcttctaagccggttaaggcttttcttgagtcctggatatccgtat
gaagagatgctcagggcattccacaaccaaactagcattatcatgtgttcctatcttccc
atcttcaagtctttcaacagaacaaaaggtggtttgattcagttaaatcacgggaagcca
cacccccttcaatatgtggtcaacgctgcattccttgcttctgtgttcagtgactatctt
gaggctgcggatacccctggatggtattgtggcccccatttctactctattgaggttctt
cggagctttgcaaggactcagattgagtacatcttaggaaagaatcctttgaagatgagc
tatgtggttgggtttggaaagcattaccccaagcatgttcaccaccggggtgcgtcgatc
cccaagaacgctgttcactatggctgcaaaggagggtggaagtggagggacaccaagaag
ccaaaccctaacatcatagttggagccatggtcgctggccctgatcgccatgatggattc
aaagatgcccgcaagaactacaactacactgaagcaacgctggcgggcaatgctggtcta
gtcgcagcattggtagctttgtcaggtgaaggccatggggtggacaagaacacgatgttc
tctgcagtgccgcccatgttcccttcacctccaccaccaccggggccatggaaaccatag
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