Panicum virgatum (switchgrass): 120652493
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Entry
120652493 CDS
T07260
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120652493
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
120652493
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120652493
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
120652493
NCBI-ProteinID:
XP_039786275
LinkDB
All DBs
Position
9K:55876243..55899614
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AA seq
432 aa
AA seq
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MQKLKYIWMCQSVGPQMKPTFPPPGLYKSNGYLLVSCNGGLNQMRAAICDMVTVARYLNL
TMVIPELDKQSFWADPSDFGDIFDVNHFIDSLRYEVKIVKELPQKFIEKVPLSMQPISWS
SEKYYLRQILPLVRKHKVVRFSKTDSRLANNGLPLKLQKLRCYVNYNALRFTPSIEALGN
KMISILRRTGSFIVLHLRYEMDMLAFSGCTHGCSDEETEELTRMRNAYPWWKEKEIDSEK
KRLEGLCPLTPRETTLVLKALGFPRDTRIYIASGEIYGGEKRLAVLKTEFPNVVRKEMLL
SDDELRPFQKHSTQMATLDYLVSVASDVFIPSNDGNMAKVVEGHRRFTGFHKTIQLDRKK
LVELIDLFEDQELSWEEFSVAVKELHMGRMSQPTRRRVIPGQPKEEDYFYANPHECLGPA
RKRMERVKHIEI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagttaaagtatatttggatgtgccaatcagttggaccccagatgaaaccaaca
tttcctcctccaggactttacaagagtaatggctatcttcttgtttcatgcaatggtggt
ctgaatcaaatgcgagcagcgatatgtgacatggtgactgtagcacgctacttgaatctg
accatggtgatacctgaacttgacaagcaatccttctgggctgatcctagtgattttggg
gatatttttgatgtaaatcatttcattgattcattgagatatgaagtgaagattgtcaaa
gaactccctcagaagttcattgaaaaagttcctctgtcaatgcaaccaatcagctggtct
agtgagaaatactatttgaggcagatcttgcctctagtacgaaaacacaaggtggtacgt
tttagcaagacagattctcgccttgcaaataatggccttcctctgaagctacagaaactt
cgctgctatgttaactataatgcattgagatttacaccatccattgaggctctaggcaac
aagatgatctcaattcttaggagaactggatcttttattgtgcttcatctaagatatgag
atggatatgcttgctttctcgggatgtacacatggatgttctgatgaagaaacagaagag
ttgacaagaatgaggaatgcatatccctggtggaaagaaaaggaaatagactctgagaag
aaaaggcttgagggattgtgccccctcactcctcgagaaacaacattagtacttaaagct
ctcggtttccccagagacactcgaatatatattgcctcaggtgaaatatatggtggtgaa
aaaagactagctgtattgaagacagaatttcctaacgtcgtgaggaaggagatgctttta
tctgatgatgagttacgaccctttcagaagcactcgactcaaatggctacactggactat
cttgtttctgtcgccagtgatgtttttatccccagtaatgatggaaacatggctaaagtc
gtagaagggcaccgcaggtttacaggcttccataaaaccatacagttggacaggaagaag
ttagttgagcttatagatctttttgaagaccaggagctgtcctgggaagaattctctgtt
gctgtcaaggagctccacatgggccgaatgagccaacccaccagaaggcgggttatcccc
ggacaaccgaaggaagaggactacttctatgctaatcctcatgaatgccttgggcctgca
agaaagcgaatggaaagggtaaaacatattgagatttga
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