Panicum virgatum (switchgrass): 120652559
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Entry
120652559 CDS
T07260
Name
(RefSeq) calmodulin-1
KO
K02183
calmodulin
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04016
MAPK signaling pathway - plant
pvir04070
Phosphatidylinositol signaling system
pvir04075
Plant hormone signal transduction
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120652559
04070 Phosphatidylinositol signaling system
120652559
04075 Plant hormone signal transduction
120652559
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120652559
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120652559
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120652559
03036 Chromosome and associated proteins [BR:
pvir03036
]
120652559
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120652559
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Calcineurin (PPP3/ PP2B)
Regulatory subunits
120652559
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120652559
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Centriole replication proteins
120652559
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120652559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
AIF-1
EH
SPARC_Ca_bdg
EF_EFCAB10_C
EF-hand_11
UPF0154
DUF5580_M
Dockerin_1
EFhand_Ca_insen
RNA_pol_Rpb4
Caleosin
MotA_activ
SPEF2_C
FCaBP_EF-hand
SurA_N_3
PA_Ig-like
DUF6279
Fe_hyd_lg_C
MecA_N
Motif
Other DBs
NCBI-GeneID:
120652559
NCBI-ProteinID:
XP_039786352
LinkDB
All DBs
Position
9K:complement(56599971..56602325)
Genome browser
AA seq
149 aa
AA seq
DB search
MADQLTDDQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG
NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE
EVDEMIREADVDGDGQINYEEFVKVMMAK
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagctcaccgacgaccagatcgccgagttcaaggaggccttcagcctcttc
gacaaggacggcgacggttgcatcacaaccaaggagctgggaactgtcatgcgctccttg
ggtcagaacccaaccgaagctgagctccaggacatgatcaacgaggttgacgctgatggc
aacggcaccatcgacttccccgagttcctcaacctcatggcccgcaaaatgaaggacacc
gactccgaggaggagctcaaggaggcgttcagggtgttcgacaaggaccagaacggcttc
atctccgccgcggagctccgccacgtgatgaccaacctcggcgagaagctgaccgacgag
gaggtggacgaaatgatccgcgaggcggatgtcgacggtgacggccagatcaactacgag
gagttcgtcaaggtgatgatggccaagtga
DBGET
integrated database retrieval system