Panicum virgatum (switchgrass): 120652632
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Entry
120652632 CDS
T07260
Name
(RefSeq) argininosuccinate lyase, chloroplastic isoform X1
KO
K01755
argininosuccinate lyase [EC:
4.3.2.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00220
Arginine biosynthesis
pvir00250
Alanine, aspartate and glutamate metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00844
Arginine biosynthesis, ornithine => arginine
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
120652632
00220 Arginine biosynthesis
120652632
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120652632
Enzymes [BR:
pvir01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.2 Amidine-lyases
4.3.2.1 argininosuccinate lyase
120652632
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120652632
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
ASL_C2
Motif
Other DBs
NCBI-GeneID:
120652632
NCBI-ProteinID:
XP_039786444
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Position
9K:complement(57331965..57339901)
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AA seq
554 aa
AA seq
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MLEIVEVATGERLSAHELSLIEMVGSSTDGSAESSVKSSLEYVNENEPPPPAKRTVVERE
AEVVTVREVPKLWLNGKPAEPRAGERFARLLVAAEAEELWAHDVACSRVHATMLAETGLI
TAGDRDIILEGLDQIETLIQEGKFEWRKDREDVHMNIEAALIERVGEPAKKLHTARSRND
QIVTDLRLWCRDAIDKILIRIKQFQVSLVTLASKYVDLIVPGYTHLQRAQPVLLPHLLLS
YVEQLERDAGRLANCRERVNFCPLGACALAGTGLPIDRFQTAKDLKFTAPMKNSIDAVSD
RDFVLEFLAANSIAAVHLSRIGEEWVLWASEEFGFLTPSDKVSTGSSIMPQKKNPDPMEL
VRGKSARVVGDLMTVLILCKGLPQAYNRDLQVGLILISISMPILVHILKLFFSFEQEDKE
PLFDSVKAILGMLEVCTEFAQNISFNSKRIQRSLPAGYLDATTLADYLVKKGVPFRTSHE
IVGRSVQLCVTKNCQLAELQLDDLKAVHPAFEADVYEYLGVENAVNKFISYGSTGSNQVK
KQLEDWRIQLGISS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgctggagatcgtggaggtggcgacgggcgagcggctgtcggcgcacgaactgagcctt
atcgagatggttggcagctcaacggacggctccgcggagtcgtcggtgaagtcatcgctg
gagtacgtcaacgagaacgagccaccgccgccggcgaaacggacggtggtggagagggag
gcggaggtggtgacggttcgggaggtcccgaagctgtggctcaacggcaagccggccgag
ccccgcgcaggggagcgcttcgccaggcttcttgtggcggcggaggctgaggagctgtgg
gcgcacgacgtcgcgtgcagccgcgttcacgcgaccatgctcgccgagacgggtttgata
actgctggcgatagggatatcatcttagagggtctcgatcagattgagacgttgattcaa
gaaggcaagtttgagtggagaaaggatcgggaggatgtgcatatgaacattgaagcagct
ctgattgagagggttggtgagcctgcgaagaagctgcacactgctaggagccgcaatgac
caaattgtgacggatctaaggctatggtgccgtgatgctattgacaagatcttgattcgt
atcaagcagtttcaggtgtccttggttacattagcttcaaaatatgttgacttgatagtc
cctggttatactcatctgcaaagggcacagcctgttttgctgccacatcttctcttatca
tatgttgaacagctggagcgtgatgctggtcgtttggccaactgcagggagagagtgaat
ttctgccctcttggagcttgcgctttggctggaactggacttcccatcgacaggtttcag
accgctaaagatttgaagtttacagctccgatgaagaacagcattgatgcagtatcagac
cgtgacttcgtattggagtttcttgctgccaattcaatcgctgctgtccatctttctcga
attggtgaagaatgggttctttgggcatcggaggagtttgggtttctgacaccaagtgac
aaagtttcaacgggaagtagcatcatgccacagaagaaaaatccggatccaatggagctt
gttcgtgggaagtctgctagggttgttggagatctcatgactgtgctaatcctctgtaag
ggccttccacaggcctacaaccgtgatcttcaggtgggcctcattctcataagtatatcc
atgcctatattagtgcatattcttaaactttttttttcttttgagcaggaagacaaggaa
ccgttgtttgatagcgtgaaggccatattaggaatgcttgaagtttgcacggagtttgct
cagaacatttcttttaattcaaaaagaatacaacgttccttgccagctggttatctggat
gcaacgacattagcggattatcttgtgaagaagggagttccattcagaacttctcatgag
atagtcggaaggtctgttcaactatgcgtcaccaagaactgtcaactagctgaacttcaa
ctggatgatctaaaagccgttcatccagcgttcgaggccgacgtgtacgagtatttgggg
gttgaaaatgctgtaaacaagttcatatcttatggctccactggttcaaatcaagtaaag
aagcagctcgaggattggcgcatccagctcgggatcagctcataa
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