Panicum virgatum (switchgrass): 120652665
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Entry
120652665 CDS
T07260
Name
(RefSeq) calpain-type cysteine protease DEK1
KO
K25378
calpain-type cysteine protease DEK1 [EC:3.4.22.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120652665
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C2: calpain family
120652665
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
120652665
NCBI-ProteinID:
XP_039786479
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All DBs
Position
9K:complement(57674950..57690085)
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AA seq
2160 aa
AA seq
DB search
MEEEGHHGVVLACSICGFLFAVLSPLSFWVLWAVNWRPWRLYSWIYARKWPAYVQGPQLS
TLCSFLTLVAWLVVISPIAVLLVWGGILIALLERNIIGLAVIMTGVAFLLSFYSIMLWWR
TQWQSSKAVAYLLLLAVGLLCAYEFCAVYVTAGASASELHSPSGFFFGVSAISLAINMLF
ICKILFNVSGFDVDEYVRRSYKFAYSDCVEVAPVSCSPDPPDPSELYMTKSSRVLHLGLL
YVCSLLVLVVYSILYGLTSKEARWLGALTSVAVVILDWNLGLCSFRFELLKSRVIVLFVA
GTSRAFLICFGVHYWYLGHCISYAFVASVLLSAAVSCWLSISNPSVARIDALRSTVIKLR
EGFRRKGQNSSSNSSEGCGSSVKRSSGSVEAGQNGNATDSMYRSNSQSDGVNWNSIPFDR
SNSCQEGQSSDKNIDSGRASLAHRSNSCLSAVHSETAVTTADRHGEPTASLVVCSSSGLE
SHGCESSGSATASGNQQLLDLNLAAIFQDRLNDPRISSMLKKNGGLGDVELANLLQDKGL
DPNFSYMLKDKVMDPRILALLQRSSLDADREHQDDVDVTATDSDRLDTTIANQISLSEEL
RRSGLEKWLNISRLIFHQLAGSPIRAFIVFTILFIIETATVAIHRPETIKVINATHEQFE
FGFSILLLSPVVCSIMAFIWSLRAEDMMMTSKPRKYGFIAWLLSTCVGLFLSFLSKSSVI
LGLSLTLPLMVACLSFAIPIWMRNGYRFWIPGREFDNRENVSQAPGTKERVLFVISIAVF
TASVIGLGAIVSAKPLDALGYKGWDADKNSFYSPYATSMYLGWALSSTIAVLTTGLIPIV
AWFATYRFSPSSAVCVGLFATVLVSFCGASYWGVVNSREDGVPLKADFLAALLPLLCIPA
FFSLFTGLYKWKDDDWKISRGVYLFVGMGMLLLFGAVAAVIVTIRPWTVGVAGLLAILFL
VFVIGVIHYWTSNNFYLTRTQMLLVCSIAFLLALAAFMMGLFHGKPFVGASMGYFSFIFL
LTGRALTVLLSPPIVVYSPRVLPVYVYDAHADSAKNVSYAFLILYGIALATEVWGVIASI
IMNPPFVGAGISATTLVIAFGFAVSRPCMTLKMMEDAVHFLSKDTVVQAMSRSANKTRNA
ISGTYSAPQRSASSAALLVGDPALTLDRAGNFVLPRADVMKLRDRLRNEEIAAGSFFCGV
KDCLMTCPHSLANVDYRRNMCAHARILALEEAIDTEWVYMWDNFGGYLLLLLGLTAKAEQ
IQDEVRLRLFLDSIGLSDLSAKEIKKWMPEDRRQFELIQESYIREKEMEEEALMQRREEE
GKGRERRRALLEREERKWKELEISLLSSIPNTGSRDAAAMAAAVRAVGGDSALEDSFARD
RVSSIANHIRKAQLARRAEQTGIPGTVCILDDELRSTGRHCGELESCLCLSQKVTLSIAV
MVQPVSGPVCLFGSEFQKKVCWEILVAGSEQGMEAGQVGLRLVTKGERITTVAKEWNIGA
SSIADGRWHLVTVTIDADLGEATSFIDGNYDGYQNGLPLPTINGIWEPGTDIWVGARPPI
DLDAFGRSDSEGSDSKMQIMDAFLWGRCLSEDEVAALHTAMSPAEHGFFDLAPGDAWHGS
YSARVDDWESEEAYELYDQGDVEWDGQYSSGRKRPVHDAVAIDIDSFARRPRKPRFETRD
EVNQRMLSVERAVRDALIAKGERNFTDQEFPPDDRSLFVDPSDPPLKLQVVSEWMRPSDI
AKEISINSHPCLFSGSVNSSDVCQGRLGDCWFLSAVAVLTEMSRISEVIITPEYNEEGIY
TVRFCIQGEWVAVVVDDWIPCESPGKPAFATSKKQNELWVSILEKAYAKLHGSYEALEGG
LVQDALVDLTGGAGEEIDMRSPQAQIDLASGRLWSQLLYFKQEGFLLGAGSPSGSDVHIS
SSGIVQGHAYSILQVREVDGHKLIQIRNPWANEVEWNGPWSDSSPEWTERMKHKLMHVPQ
SKNGVFWMSWQDFQIHFRSIYVCRVYPPEMRYSVHGQWRGYSAGGCQDFDSWHQNPQYRL
RVTGRDALYPVHVFITLTQGVGFSRKTNGFRNYQSSRDSSMLYIGLRILKTQGCRAAYNI
YMHESAGGSDYVNSREISCELVLDPYPKGYTIVPSTIHPGEEAPFVLSVFSKAPIKLEAI
NT seq
6483 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggagggacaccatggagttgttttggcatgcagcatctgtgggttcctcttt
gctgtccttagccctcttagcttttgggtcctatgggctgtgaattggaggccatggagg
ttatacagctggatatatgcaaggaaatggccagcatatgtgcaaggacctcaactaagc
acgctctgcagctttttgactcttgttgcatggcttgttgtcatttcccctatagcagtt
ctgctcgtgtgggggggcatccttatcgctcttctggaaaggaacataattggtttagct
gttataatgacgggtgttgcttttcttttatcattctactctataatgctctggtggaga
acacagtggcaaagctcaaaggctgttgcttaccttctcctcctggcagtcggcctactt
tgcgcctacgaattttgtgctgtttatgttacagctggtgctagtgcttccgagcttcat
tctccatcagggttcttctttggggtgtcagcaatatcattggccatcaatatgctcttt
atatgtaaaatactgtttaatgtaagtggatttgatgttgatgagtatgtgcggaggtcg
tacaaatttgcctattctgactgtgttgaagtggctcctgtttcatgctctcctgatcca
ccagatcctagtgagttatacatgacaaaatccagcagggtcttgcacttagggcttctc
tatgtctgctcactgcttgtgcttgttgtctattctatcttgtacggtcttacctcaaaa
gaagctcgttggctgggtgctttaacttcagttgcagtggtgattcttgactggaatctt
ggcttgtgttcatttaggtttgagcttctgaaaagtcgggtgatagtgttatttgtggct
ggaacatcaagggcttttcttatatgctttggagtgcattactggtaccttggccattgc
atcagttatgcctttgtagcatctgtgcttttatctgctgctgtctcttgctggctttct
atttcgaacccctcagtggcaaggatagacgctctaagaagtacagttataaagctgcga
gagggatttcgaagaaaaggtcaaaatagctcttcaaattcatcagaaggttgcggctcc
agtgtgaagcgtagtagtggtagtgttgaagctggtcaaaatggtaatgcaactgattct
atgtacagaagcaattcacaaagcgatggtgtcaattggaacagtattccttttgatcga
tctaatagttgtcaagaaggccagagctctgacaagaacatagatagtggacgtgcaagt
ttagctcatcggagtaattcatgtctctctgctgtccactctgaaactgccgttactaca
gcagataggcatggagaacccactgcttcacttgttgtttgttctagcagtggtttggaa
agtcatggttgtgagtctagtggatcagctaccgcctcaggtaatcaacagttattggat
ttgaacctggcagcaatatttcaggacagattaaatgacccaaggatttcatctatgcta
aaaaagaatggtggacttggagatgtagaactagctaatcttcttcaggataaaggcctg
gatccaaatttttcctacatgctgaaagacaaagttatggatccacggatattagctttg
ctacagaggagcagcttggatgcagatagagagcatcaagatgatgtagatgtcacagct
actgattcagacagattggataccactattgcaaatcagatctctctgtctgaagaactt
aggagaagtggtctggaaaaatggttgaacatttcaaggctaattttccatcaattagct
ggctctccaatccgtgcttttattgtcttcactatattgttcatcatagagactgcgact
gtggctatccatcgaccagagaccatcaaggtgataaatgcaacacatgaacagtttgaa
tttggtttctcgatactgctcctgtcaccagttgtctgctccatcatggcattcatttgg
tctctgcgtgctgaagacatgatgatgacatccaaaccccggaagtatggtttcattgcg
tggctgctgagtacatgtgttggtttgtttctctctttcttaagcaagtcatcagttata
ttgggcttgtctctcacattaccgcttatggtggcttgtctctcatttgctattcccata
tggatgcgcaatggttaccgtttctggattcctggaagggagtttgataatcgtgaaaat
gttagtcaagctccaggaacgaaagagcgggttctctttgttatcagcatagctgttttc
actgcatcagttattggccttggcgccatagtatcagcgaagccattagatgctttaggc
tacaaaggctgggatgctgataagaacagcttctattctccctatgcaacatcaatgtat
cttggatgggcattatcttcaacaattgctgtacttaccacggggttgatacctattgtt
gcttggtttgccacataccggttttcaccttcatcagctgtgtgtgtcggcctctttgct
actgttcttgtatccttttgcggtgcatcttactggggagtagtaaattcacgagaggat
ggtgttcctctgaaggctgatttcctggcagcattacttcccttgttatgcattcctgca
tttttctcactgttcaccgggctatacaaatggaaggatgatgattggaagatttctcga
ggcgtttacctttttgttggcatgggaatgttgctgttatttggtgcagttgcggctgtt
attgtcacaatcaggccctggactgttggagttgctggcctccttgctattctgttcctt
gtatttgttattggggtcatccactactggacatctaacaacttctatttaacaaggact
cagatgctgcttgtttgttccattgcttttctcctagccttggctgccttcatgatgggt
ttatttcatggaaagccttttgttggagcatctatgggttacttctcatttatatttctt
ctcacaggaagggctttgactgttcttctatcaccaccaattgtagtgtattcaccaaga
gtgttgcctgtatatgtttatgatgctcatgcagactctgctaagaatgttagctatgcc
ttccttattctgtatgggattgcactggcaactgaagtttggggtgttattgctagtata
ataatgaatccaccatttgttggggctggcatttctgccactactcttgtaattgccttt
ggttttgctgtttctcggccatgcatgactcttaagatgatggaggatgctgttcatttt
ctcagcaaggatacagttgtgcaggcaatgtcacggtccgctaataaaactaggaatgct
atatctgggacttactcagcgccgcagaggtctgcaagctctgctgctcttttagttgga
gatcctgctcttacattggacagggctgggaactttgtgcttcctagggctgatgttatg
aagctgagagaccgtttgagaaatgaggagattgctgcaggatctttcttctgtggagta
aaagattgtttaatgacttgtcctcattccctggcaaatgtagattatcgaaggaatatg
tgtgcccatgcacgtattttagctttagaagaagcaatcgatactgaatgggtgtatatg
tgggacaattttggcggttatttgcttctgttgcttggactgactgccaaagctgaacaa
atacaggatgaagttcgtctaagactcttcttggatagcataggtctttctgaccttagt
gccaaagaaattaagaaatggatgccagaagatcggaggcaattcgagctcattcaagaa
agctacataagggaaaaagaaatggaagaggaggcattgatgcaaaggcgagaggaagaa
gggaagggaagagaaaggaggagggcattgctggaaagagaggaacggaaatggaaggaa
cttgaaatatcattgctttcttctattcctaatactggaagcagagatgctgcagctatg
gcagcagctgtcagagctgttggaggtgattctgctctggaagattcttttgcaagagat
agggtatcttcaatagccaatcacatacgaaaggcacagttggctcggcgagcagaacag
actggcattccaggcactgtatgcatacttgatgacgaactgaggagtactggtcgtcat
tgtggagaacttgagtcatgcctctgtctaagtcaaaaagttactttgtccattgctgta
atggttcaaccggtatctggtccagtgtgtctttttggaagtgaattccaaaagaaggtt
tgctgggaaatcttagtggcaggatcggaacagggaatggaagctgggcaagttggtctt
cgattagtgactaagggtgaaaggataaccactgttgctaaagaatggaatattggtgca
tcaagcatcgcagatggcaggtggcatcttgtcactgtaactatagatgccgacctaggt
gaggcaacttctttcattgatggaaattatgatggatatcagaatgggttgccgttgcca
acaattaatggtatctgggaacctgggactgatatttgggttggtgctcgaccacccata
gacttagatgcctttggtaggtcagatagtgaaggttcagattcaaagatgcagatcatg
gatgcttttctatggggaagatgcctcagtgaagatgaggttgctgcattacatacagcc
atgtcacctgccgagcatggcttttttgaccttgcacctggtgatgcttggcatggaagt
tattctgcaagggtggatgattgggaaagtgaagaagcttatgaactatatgatcaaggg
gatgttgaatgggatggacagtactcaagcggtaggaagcggccagtacatgatgctgta
gctattgacattgactcctttgctaggagaccaagaaaaccaaggtttgagacacgggat
gaagtcaaccagcgtatgctctccgttgaaagggctgtcagggatgctcttatcgcgaaa
ggagagagaaactttactgatcaagagttccctccagatgatcgttctttatttgtagat
ccatcggatccccctctgaaactgcaggttgtttctgagtggatgaggccttctgacata
gcaaaggagatatctatcaattctcatccttgcttgttttctggttctgtgaattcctca
gatgtgtgtcagggtcggttgggggactgttggttcttaagtgcagttgcagttttaact
gagatgtcccggatatcagaagttataatcactcctgaatacaacgaagaagggatttac
actgtcagattctgcattcagggtgagtgggtagccgtggttgttgatgattggatcccc
tgtgaatctccgggaaaaccagcatttgctactagtaaaaagcaaaatgagctttgggta
tccattcttgagaaagcttatgcaaaacttcatggctcttatgaggcattagaaggtggg
cttgttcaagatgctcttgtggatctcacaggaggggctggtgaagagattgatatgcga
agtccccaagcgcagattgatcttgctagtggaagattgtggtcgcagttgttgtatttc
aaacaagaaggttttcttcttggtgctggaagtccttctgggtccgatgttcacatctca
tcaagtggcattgttcagggacatgcatactcaattttgcaggtaagagaagttgatggc
cacaaactcatccaaattagaaatccatgggcaaatgaagttgaatggaatggaccgtgg
tcagactcttcaccagagtggactgaacggatgaagcataagcttatgcatgttccacag
tcgaagaatggagtattctggatgtcttggcaagattttcagattcactttcggtcaata
tatgtctgtcgtgtttatccacctgagatgcgttactctgtccatgggcaatggcgtggc
tatagtgcaggtggttgccaagattttgattcatggcatcaaaatcctcagtatcgactt
agagtaacaggacgtgacgcactatatcctgttcatgtttttattacccttactcagggt
gttggtttctctagaaagacgaacggtttccgaaactaccaatcgagtcgtgattcttca
atgctctacattggactgaggatactcaagacacagggctgtcgggctgcttacaatatc
tacatgcatgaatcagcgggtggatcagattacgttaactcaagagagatatcatgtgaa
ctggtcttggatccttatcctaaaggatacacgatcgtgccaagtaccatccatcctggg
gaggaagcaccttttgttctttcagttttctcaaaagcaccaatcaagctagaggctatt
taa
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