Panicum virgatum (switchgrass): 120652788
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Entry
120652788 CDS
T07260
Name
(RefSeq) UDP-glucuronic acid decarboxylase 1-like
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
pvir01250
Biosynthesis of nucleotide sugars
Module
pvir_M00997
UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120652788
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
120652788
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
adh_short
Motif
Other DBs
NCBI-GeneID:
120652788
NCBI-ProteinID:
XP_039786650
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Position
9K:58733892..58736904
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AA seq
417 aa
AA seq
DB search
MKQLPRQSSMTKQHRPHHHRTSLSRTLASYLLREQRLLFVLLGFLLASSFFLLYPSLTPH
PAAAGSSAATNFFAAAVARKIPRGGVSSVSAASGARRLPVGVRKPSLRVVVTGGAGFVGS
HLVDKLLARGDSVIVVDNFFTGRKDNVAHHLSNPRFELIRHDVVEPILLEIDQIYHLACP
ASPVHYKFNPIKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKESYWGHV
NPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQAL
RKQPMTVYGDGKQTRSFQYVSDLVDGLVILMESNHIGPFNLGNPGEFTMLELAQVVKETI
DPGASVEFKPNTADDPHMRKPDISKAKSLLNWEPKISLKHGLPRMVSDFQKRIMEEK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctgccccggcagtccagcatgaccaagcagcaccgcccgcaccaccaccgc
acctcactctcccgcaccctcgcctcctacctcctccgcgagcagcgcctcctctttgtc
ctcctcggcttcctcctcgcctcctccttctttctcctctatccctccctcaccccgcat
cccgccgccgccggctcctctgccgctaccaatttcttcgctgctgccgtcgccagaaaa
atcccccgcggcggcgtctcatccgtatccgccgcgagcggcgcgcgccgcctcccggtt
ggcgtccggaagccctccctgcgcgtcgtcgtcaccggtggcgctgggtttgtcggcagc
cacctcgtcgataagctcctcgcccgcggggacagcgtcattgtcgtcgacaacttcttc
acgggccgcaaggacaacgtcgcgcaccacctcagcaacccgcgattcgagctcatccgc
cacgacgtcgtcgagccaatcctcctcgagatcgaccagatctaccacctcgcctgcccc
gcatccccagtgcactacaaattcaaccccatcaagaccatcaagacaaatgtcatgggg
accttgaacatgcttggactagctaagagggttggggcccggttcttgctgactagtacc
agcgaggtgtatggtgatcctcttgaacatccacagaaggagagttactggggccatgta
aatcccataggtgttaggagctgttacgatgaggggaagagaacagcagaaactcttaca
atggattatcatcgtggcgctggtgttgaggtgagaattgcacgcatattcaacacgtat
ggccctcgtatgtgtttagacgatggtcgagttgttagcaactttgttgcacaggctttg
cggaaacaaccaatgacagtatatggtgatggaaaacagactcgaagctttcaatatgtt
tcagatttggttgatgggttggtaattctgatggaaagtaaccatattggaccttttaac
ttgggaaatcctggagaatttacaatgttggagcttgcgcaggtggtaaaagaaacaatc
gaccctggtgcatctgtcgagttcaaacccaacactgcagatgatccacatatgagaaaa
cctgacatctctaaggccaaatctcttctgaattgggagcccaaaatctcactgaaacat
ggcctgccgcgtatggtctcggacttccagaaacgtataatggaagagaaatga
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