Panicum virgatum (switchgrass): 120652798
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Entry
120652798 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase CSU1-like
KO
K13125
nitric oxide synthase-interacting protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120652798
Spliceosome [BR:
pvir03041
]
Complex C
Other components
Complex C specific factors
120652798
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-NOSIP
Rtf2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_5
zf-rbx1
Zn_ribbon_PaaD
RING_XB3-XBAT31
FYVE
RE_Bpu10I
Motif
Other DBs
NCBI-GeneID:
120652798
NCBI-ProteinID:
XP_039786658
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All DBs
Position
9K:complement(58876210..58878084)
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AA seq
304 aa
AA seq
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MPQRHSKNNNDLAFFTYEEKRKLGYGTQRERLGKDSIKPFDACCLCLKPLIDPLCCPKGH
AFCKECILECLLAQKKDIKRKLAAHEAQKKQEKEEEDEKLMLQKAKELDAFDQQNHGAVP
QYHDRSGSQDKNGFHGANSVKVTSFEEEALRNMKAFWLPSATPEATVKVDAPSTNTVCPE
GQEKLKLKSLFPISFTEENADQKSKKSVEKSYMCPSCKSTLTNTMSLVAISTCGHVFCKK
CSDKFLVKDKVCLECNKPIKERNLVALEKGGTGFAAHDECLEARDFKYLGSGSGLGLVKP
APKT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagcggcactcgaagaacaacaacgacctcgccttcttcacgtacgaggagaag
cggaagctcgggtacggcacgcagcgggagcgcctggggaaggactccatcaagcccttc
gacgcctgctgcctctgcctcaagccgctcatcgacccgctctgctgccccaagggacac
gccttctgcaaggagtgcatcctcgagtgcctcctcgcccagaagaaggacatcaagcgc
aagctagcagctcatgaggcccagaaaaagcaagagaaggaagaggaagacgagaagctg
atgctgcagaaggctaaggagttggacgcctttgatcagcagaatcatggagctgttccc
cagtaccatgatcgcagtggctcccaagacaagaatgggtttcatggagcgaacagtgtg
aaggttacttccttcgaggaggaagctctccgtaatatgaaggcattctggctcccttca
gctactcctgaagctacggtcaaggtagatgccccctccaccaacacagtctgccccgag
gggcaggagaagcttaagttgaaatcgctcttcccaatctcgttcactgaagaaaatgct
gaccagaagagcaagaagtcagtggaaaagagctacatgtgccctagttgcaagtcaacc
ctcacaaacaccatgtccttggtggcgatcagcacctgtggccatgtcttctgcaagaag
tgctctgacaagtttctagtgaaggataaagtttgcttggagtgtaacaaaccaattaag
gagaggaatctggttgctttggagaaaggtggaaccggatttgctgcgcatgatgaatgc
ttggaggcaagggatttcaagtatttggggagtggttctgggttagggttagtgaaacca
gctccgaagacttag
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