Panicum virgatum (switchgrass): 120652883
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Entry
120652883 CDS
T07260
Name
(RefSeq) serine/threonine-protein kinase ATG1c-like isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120652883
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120652883
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120652883
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120652883
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120652883
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: Other
ULK family [OT]
120652883
Membrane trafficking [BR:
pvir04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
120652883
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120652883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
MIT_ATG1
ABC1
Kdo
ATG1-like_MIT2
Pkinase_fungal
YrbL-PhoP_reg
APH
Pox_ser-thr_kin
Motif
Other DBs
NCBI-GeneID:
120652883
NCBI-ProteinID:
XP_039786753
LinkDB
All DBs
Position
9K:59736096..59742916
Genome browser
AA seq
721 aa
AA seq
DB search
MGDGASGRGGGGGGGRRVGEYELLRPIGSGAYSQVWLGRHWARGTEVAVKEIAMERLSSK
LRESLLSEVDILRRIRHPNVIALHDSVKDHGRIYLILEYCRGGDLHAYLQRHKRVSETVA
KHFIRQLASGLQMLRDNNVVHRDLKPQNILLVENNENSLLKIADFGFAKFLQPFALAETL
CGSPLYMAPEVMQAQKYDAKADLWSVGVILYQLVTGIPPFNGDNQIQLLRNILRSCEIRF
PSDCELSHGCIDLCRKLLRLNSVERLTVEEFVHHPFLSEQAPERTLSRTSSDIRDLPSSQ
SSQEDCMPFPLDDESSGQDDSPVPDSKSPMKSYGFPMGKRLDKTSGQSPSKHIGLFSRYI
LGNNHPPSSQHHDHAGKKTKESNIDEVQGRKGGYPEDSPIIDSLEFVDQEYVFVSGPHPE
GSSSSTNASRQLNLPAKYDNSSVSPPKLTLSSAPMPINGFPINRQQSAGTGSLDSHCSPA
SGTSQGSADMSDAIDQPPSDYLTRIRLLEQYASTIAGLVKDEIKAGRHLEAFSIQLIVLA
TWKQAIHLCNTFVASATRESLSQDIHAAVVPPLLSADIISRISMKGLSADVPPLLANSQL
VDDVCTQIERQFLSDVEYAEELASTVGQIADGTEMPDAIEIIFQSALHIGRRGGVDEMFG
KAADAKTGYTRAVSMLRFLLIEAPSLALNPPLTLTRSDRHRLRTYIEALNTRLGQMHSQR
H
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgggggacggcgccagcggccgcggcggcggaggcgggggcgggcggcgggtgggggag
tacgagctgctgcggccgatcgggtcgggggcgtactcgcaggtgtggctggggcggcac
tgggcgcggggcacggaggtggcggtgaaagagatcgccatggagcggctcagcagcaag
ctccgcgagagcctcctctccgaggtcgacatcctccgccgcatccgacaccccaacgtc
atcgcactccacgactccgtcaaggatcatgggaggatatatctcatattggagtattgc
cgaggtggtgacttacatgcataccttcaacggcacaaaagagtttctgaaacagttgca
aagcatttcatccgtcagttagcatctggtctgcaaatgcttcgtgacaataatgtggtt
catcgagacctaaaacctcagaacattcttcttgttgaaaacaatgaaaattctctgttg
aagattgccgactttggatttgcaaagtttttgcaaccatttgcccttgctgaaacactt
tgtggttcaccactttacatggctccagaagtcatgcaagcacagaagtatgatgcaaag
gcagatctatggagtgttggtgtcattctctatcaacttgttaccggaattccacctttt
aatggggataatcagatccagctgctaagaaatatactcaggtcatgtgaaatacgattc
ccatctgattgtgagttgagccatggttgcattgatttgtgcagaaagttgctgcgactc
aattcagtggagcggcttacagttgaagaatttgtgcatcacccatttctttctgaacaa
gctccagagaggaccttgagccggacatcatctgacataagagatttgccttcaagccaa
agttctcaagaagattgtatgccttttcctttggatgatgagtcaagtggacaggatgac
agtccagttcctgacagtaaaagtccgatgaaatcttatgggttccccatgggtaaaaga
ttggacaaaacttcaggccagagtccatcgaaacatattggtctgttctccagatatatc
ttgggtaataatcatcctcctagtagccagcaccatgaccatgctggtaaaaagaccaag
gaaagcaacattgatgaagtacaaggtcgtaaaggtggttatcctgaagattcccctatc
attgattcattagagtttgtagatcaggaatatgtctttgtgtctggaccgcacccagag
ggatcatcttcttcaacaaatgcctctcgacagctgaacttgccagcaaaatatgataat
tcatctgtttcaccacctaagttgactttatcgagtgcaccaatgccaataaatggtttt
ccgattaatagacaacaatctgcggggactggtagcttggatagccattgttctccagca
tctggcacttcacagggatccgcagatatgagtgatgccattgatcagcccccatctgat
tatctgacaaggattagattgttggagcagtatgcatcaaccatagcagggttggtcaaa
gatgagatcaaagctggcagacacttggaggcgttctctattcagctaattgttcttgca
acctggaagcaagcaattcatttatgcaatacatttgtagcttcagctacaagagagtct
ctctcccaggatatccatgctgctgttgttccccctttgctaagtgctgatattatatcc
aggatatctatgaaggggctaagtgctgatgttccccctttgcttgcaaactcccagctg
gttgatgatgtctgcacgcagatagagagacagtttctctctgatgttgaatatgctgaa
gaactagccagcactgtaggacagatagctgatggtacagagatgcctgatgcaattgaa
ataatatttcagtctgccttacatataggaagacgtggtggtgtcgatgagatgtttggg
aaagctgcagatgccaagactgggtatacaagggcggtatccatgctgcggtttctcctg
atcgaggcaccatcactggccctcaaccctcctttgactctgacaagatccgatcggcat
cggctgcgcacatatatcgaagctctcaacaccaggcttggccagatgcacagccagagg
cactaa
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