KEGG   Panicum virgatum (switchgrass): 120652936
Entry
120652936         CDS       T07260                                 
Name
(RefSeq) uncharacterized protein LOC120652936 isoform X1
  KO
K26118  ATPase family AAA domain-containing protein 5
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvir03032]
    120652936
DNA replication proteins [BR:pvir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    120652936
SSDB
Motif
Pfam: Rad17 AAA FleQ AAA_14 AAA_22 AAA_16 DUF815 RCF1-5-like_lid
Other DBs
NCBI-GeneID: 120652936
NCBI-ProteinID: XP_039786820
LinkDB
Position
9K:60180765..60194314
AA seq 1288 aa
MGGSADPEAPSPSPSPSPVKPSPPSADGKRPRRSVQSKLSWGLVKPAGGAGVAANGGQPE
AVPPVPAAEEAAMEEVREEPEKGKKKRKPRKSEPSRKPPSKGEKTGQDPASKDEVITVDE
SPQKKQRKGRKQDAAPKMPNANRKRCKALESPDGPGSCQQFHISQIEAGSPEAAPILIDV
DLMSTPSKAGHVNDDLDVVASQDKSPLVVDLRSEAKMAAEENRRLSSGKKMHPFFASRKM
SKGASQDQDVMNIEDVHGLWDFERDPPFYPIHVTYQLEASMLIHWSNWIITDLSSLDTDA
VALLQKSVSFFEGLVKPLTIETTCKRHSNQVAELILSECKTSGMAFSNFSDKQSEHNCPL
DVIDVDNYLVSNARCQASLLDLHGRPEVPQNGCEPACYLWTDKYRPETAAQVCGNSEHVK
FLAEWLKGWDERGHKIGAANGDTNDSSYQDESDVDSSDNASDCENVLLITGPVGCGKSAA
VFACAREQGFNIIEVNTSDMRNGAYVRQKFEEATKSHGLEKWSQEEVIVPLRDDDSLNPA
SGTPDTTEYQNSVSRATRVVIDCDQQKSPAGYYSGSKVNDEAPKQVVNKTLILFEDVDTV
FDDDRGFISTILKMAETTKWPIILTSNRKDPSLPNLLDQLALDFKYPSTSELLSHVAMIC
KSEGVDVTVPQLKRVIDICLGDIRRTVMLLQFWHQGKQQSTERPNGCLCGPFSLDLDAVH
STVPKMLPWEFPCKLSETIYMEVDKTILVAEEKKKQMEVSYLEGLHLQVTAPLIKGRSTA
KTRKAKKSKLKRGHSVEHNDISPCKNDLDDFHDLPDIPLPSDQQLKRNRRGSLLLSESDD
DPADAHTEKHDIFTVTEVGFPQLSEAPHRHGQGVPNEFIFPIESMETFGMADSFKNPPES
NMSGSISQVCDTFMSQGVSCVPESSFIVEGTSASISDNDFLSRAVSNELSTFHDSGTYTA
FRTVLEDNDNAKNAMAEREKDVEDVVGETSEAYVESFGRNEQASCSTAGFQLMDECSRAE
SIWLLSGKKSNDSCKVEQVQDTWNRLRNCRPELSREANHNRAVSGALKLASGVSDLISEL
DLMLSRCYPLTKDMLDPPSTPFTEPDDFSWYSNQVEMGSIYGQHALCIFSRKSQCIGGSS
VDLSQDLLLASTAAVSLGKIISSGLRKNCGSANVSHIQNPTNCISKRRERQVLLCETLSP
IVPPKLLQSLRGPAFVDYLSSVGQISRLENLRLSESKGINKQRRARQSRHYLSSGTLLLS
PEDVVLLAESGCFGCRREKVIEQAPCSI
NT seq 3867 nt   +upstreamnt  +downstreamnt
atgggcggatccgccgatcccgaggcgccatcgccgtcgccgtccccgtctccggtgaag
ccgtcgccgccgtcggctgacgggaagcggccgaggcggtccgtgcagtcgaagctgtcg
tgggggctggtcaaaccggccggcggagctggagtggcagccaatggaggacaaccggag
gctgttcctcctgtgcctgcggctgaggaggcggcgatggaggaggttagggaggagcca
gagaagggaaagaagaagaggaagccgcggaagtcagagcccagcaggaagcccccttca
aaaggagagaaaactggccaggatcctgctagcaaggatgaagtcattacggttgatgaa
agccctcagaaaaagcaaaggaaaggcagaaagcaagatgcagcaccgaaaatgcctaat
gccaatagaaagcgctgcaaggcattggagtcacctgatggtcctggtagctgtcagcaa
tttcatattagccagattgaagccggttcacctgaagcagcaccaatattgattgatgtt
gatttgatgagtacgccgtctaaagcaggacatgttaatgatgatttggatgtggtagcc
agtcaagataaatcaccattggtagttgacctaagatcagaggctaagatggctgcagag
gaaaatcgaaggttatcttctggaaagaaaatgcaccctttctttgcttctcggaaaatg
agtaaaggtgctagccaagatcaagatgttatgaatattgaagatgtgcatggactttgg
gattttgagagggatccacctttttatcctattcatgttacataccaattggaggccagt
atgctaattcactggagcaattggataatcactgatctgtcttcccttgacactgatgct
gtggctcttcttcaaaaatctgtgtcattctttgagggcttggttaaaccactaacaata
gaaactacttgcaagaggcattccaatcaggtggcagagctgattctttctgagtgtaaa
acttcaggaatggctttctctaatttctctgacaagcaaagtgaacataactgtcctttg
gatgtgatcgatgtggacaactacttggtgtccaacgcccgttgccaagcttctcttctt
gatctgcatggacggccagaagttcctcagaacggttgtgagcctgcctgttacttatgg
accgacaagtaccgacctgaaactgcagcccaggtatgtggaaatagtgaacatgtaaag
tttctcgctgaatggctcaaaggttgggatgaaagaggccacaagattggagctgctaat
ggggacacaaatgatagctcgtatcaagatgaatctgatgtagattcttcagacaatgct
tctgattgtgaaaacgtgcttctcatcactggaccagttgggtgtggaaaatcagctgca
gtttttgcatgtgccagagaacaaggattcaatataatagaggtaaatacatctgacatg
agaaatggggcttatgtaaggcagaagtttgaggaagcaactaaatcacatggccttgaa
aaatggtcacaggaggaggtcatcgttccactgagggatgatgattccttgaatccagct
tcaggaactcctgatacaactgaatatcaaaattcagtgtcccgtgctacaagagtagtg
attgactgtgatcaacagaaatcgcctgcaggatactactcagggtccaaggtcaatgat
gaagctcctaaacaagtcgttaacaagacacttatcctatttgaggatgtggatactgtc
tttgatgacgatcgtggctttatttcaaccatacttaagatggcagagacgacaaaatgg
ccgatcatattgactagcaacaggaaggatccatctttgcctaatctcttggatcagctt
gctttggatttcaaatacccatcaacctcagagctactttcacatgttgccatgatctgt
aaatctgagggagtggatgtcaccgttcctcagttaaagcgtgtaattgatatttgttta
ggtgacattaggaggacggttatgcttctgcagttttggcaccaaggaaagcagcaatcc
acagagaggccaaatggatgtttatgtggtcctttctcacttgatttggacgcggtacat
tctactgtaccaaaaatgctgccatgggagttcccttgtaaattatcagaaacaatatac
atggaggtagacaaaactatccttgtggctgaagaaaagaaaaaacagatggaagtatca
tatcttgaaggtctgcacttacaagtaacagcacctttgatcaaaggaagaagcacagct
aaaactagaaaggctaagaaatccaagctgaagcgtggccactcggttgagcataatgat
atttcaccttgtaagaacgatcttgatgatttccatgatcttccagatatccctcttcca
tctgatcaacaactaaaaagaaataggcgtggctctttgctactatcagagtctgacgat
gatccagctgatgcacatactgaaaaacatgacatatttactgttactgaagttggtttc
ccacaactttcagaggcacctcatagacatggtcaaggggttcccaatgaattcattttt
cccattgaatcaatggagacatttggaatggctgattctttcaaaaatccacctgaaagc
aacatgtctgggtccatttcacaagtttgtgatacatttatgtcacagggcgtgtcatgt
gtgcctgagtcatccttcattgtggagggcacatctgcatccataagtgataatgatttt
ttgtcaagggcagtttccaatgaattgtctacctttcatgatagtggtacatacactgca
ttccgaactgtactagaagacaatgataatgcaaagaatgcaatggctgaacgagagaaa
gatgtggaagatgtagttggtgagacaagtgaggcttatgtggaatcgtttggcagaaat
gaacaagcaagctgttcaactgctgggtttcaactgatggatgaatgtagtcgtgctgaa
agtatctggctgctctctggcaaaaaatctaatgactcttgcaaggttgaacaagtacag
gatacttggaacaggctacgaaattgccgtcctgaactttcccgtgaggctaatcataat
agagcagtttctggagctttgaagcttgcttctggagtgtctgatttaatctcagaatta
gatcttatgctttctcgttgctaccctcttactaaggatatgttggatccaccttctact
ccttttacagagccagatgacttttcctggtacagcaatcaggttgagatgggatctatt
tatggacagcatgctctttgcattttctcaaggaagtcccaatgtataggtggtagttct
gttgatttgtcacaagacttgttgcttgccagtacagctgccgtatcccttgggaaaatt
attagttcaggacttaggaagaattgtggatctgctaacgtttctcatatacaaaatccg
actaattgtatttctaaaagaagggagcggcaggttcttctttgtgaaaccctgtctccg
attgttcctccaaagctgttgcagtcgctgagaggccctgcttttgttgattacttgtct
tcagtaggtcagatttcccgtttagaaaatttgcgactttctgaaagtaaaggcataaac
aagcaaagaagggctcgtcagtcaagacattacttgagctccggcacacttctattgtca
cctgaggatgttgtattattagcagaaagcggctgtttcggttgcaggcgcgagaaggtt
atagagcaagcaccgtgtagtatatag

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