KEGG   Panicum virgatum (switchgrass): 120652938
Entry
120652938         CDS       T07260                                 
Name
(RefSeq) partner of Y14 and mago-like isoform X1
  KO
K14294  partner of Y14 and mago
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03013  Nucleocytoplasmic transport
pvir03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120652938
   03015 mRNA surveillance pathway
    120652938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120652938
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120652938
SSDB
Motif
Pfam: Mago-bind Med9 Allexi_40kDa
Other DBs
NCBI-GeneID: 120652938
NCBI-ProteinID: XP_039786826
LinkDB
Position
9K:complement(60206360..60211350)
AA seq 228 aa
MATSSDGGGGDQRRLLSIPKEGERIIAPTRRPDGTLRKAIRIRAGYVPQEEVAIYQSKGA
LMRKSGPDVPPGYDPALAVDAKPKTKAAKRNERRKEKRQQQASSTNDKGKGLDIEDAGAA
ETDKVLSSKTDKQRDSVESVTKQIRSIAISESPAAPSTNANDSSQPESSAPDIDKKIRAL
KKKIRLAEAQLQGDSEKLKSETQEKLKKIEGWRAELKLLEDKKAPTGS
NT seq 687 nt   +upstreamnt  +downstreamnt
atggccacctccagcgacggcggcggcggcgaccagcggcgcctactctcaatccccaag
gagggcgagcgcatcatcgcgccgactcggcgccccgacggcacgctccgcaaggccatc
cgcatccgcgccggctacgtgccccaggaggaggtcgccatctaccagtccaagggcgcc
ctaatgaggaaatcagggcccgacgtgccgccggggtacgacccggcgctagcggtcgat
gcaaagcccaagacgaaggcggccaagcggaacgagcggcgcaaggagaaacggcagcag
caggctagttcgacaaatgataaaggaaagggcctggatatagaggacgctggagctgca
gaaactgacaaggttctttcctccaaaactgataagcagagggattcagtggaaagtgta
acaaagcagataagaagcattgctatttctgaatcacctgcagcgccatccacaaatgcc
aatgatagctcacaaccagaatcatccgctccagacatagataagaaaattcgagcactg
aagaagaagatacgtttagctgaagcacagctgcaaggtgactccgaaaaattgaaatct
gagactcaggaaaagttgaaaaagattgaagggtggcgtgcggagctgaagcttttggag
gacaagaaagctcccacgggttcctag

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