Panicum virgatum (switchgrass): 120652950
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Entry
120652950 CDS
T07260
Name
(RefSeq) protein DENND6B-like
KO
K28416
DENN domain-containing protein 6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120652950
Membrane trafficking [BR:
pvir04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120652950
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Gene cluster
GFIT
Motif
Pfam:
DENN
At5g52880_ARM
Avl9
Motif
Other DBs
NCBI-GeneID:
120652950
NCBI-ProteinID:
XP_039786849
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Position
9K:60347691..60351462
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AA seq
631 aa
AA seq
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MNRIPSVSLRGGADADAAAAPPDPAALARWARAFCVIRFDLERGQLVEACFPPDALTAAG
GGGGLDRLVAFSSFPDSMSHHLPRHRSSVHDSLFSFRVPDPSSPRRAFLYGFVFNRQRQD
ERLPRGGEQKSVVILSHAPYSSLFRLLLQILGPLCFDVGPSALAMVASHVAAWPAPAPGK
PMELPIGSAALRVHLPPAADDPGPPPALLPANPSVPYGLFHDADLFAAFRGLLLHLWTLW
ELMVVGEPVLVVAPSPAQCSEAVAGLVSLVAPLLYSVDFRPYFTIHDPDFARLNVLAEGE
VFPPMVLGVTNLFFLKSLKSIPNVVSVGSPNPNSTRVLPVGGQTPGIGTNGTPGKLKLDK
LAINKFSPTSLLNSIKLRREGPLSLMTEHKEALWSTYAPTTKPDTSVLNRLVDAGVSPRI
EESMSVVNNEILRRHFLELTTNFLAPFGPYLRTTTPSEGTSPFVDPPLLPPFHADEFVNG
LAARGPGKFLSKRMRSNWLDLYRRFLEGPNFMPWFRQRRAAAEQEQQRLWRQARMNVDIE
KLVSKMSELERIDSFNAVERYLLREMENSGRGSADSIAACQKLKGDLRAAFSVLPKDMQQ
LLLSNPKRAVLLQGSQEKAPGANGIVTQTSL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggatcccgtccgtctcgctgcggggcggggcggacgcggacgccgcggcggcg
ccccccgaccccgcggcgctggcgcggtgggcgcgggccttctgcgtcatccgcttcgac
ctggagcgcgggcagctggtggaggcatgcttcccgcccgacgcgctgacggcggccggc
ggcggcggcggcctcgaccgcctcgtcgccttctcctccttcccggactccatgtcccac
cacctcccgcgccaccgctcctccgtccacgactcgctcttctccttccgcgtgccggac
ccctcctccccgcgccgcgccttcctctacggcttcgtcttcaaccgccagcgccaggac
gagcgcctcccccgcggcggcgagcagaagtcagtcgtcatcctctcccacgccccctac
tcgtcgctgttccgcctgctgctgcagatcctcggcccgctctgcttcgacgtcggaccc
agcgcgctcgccatggttgcttcgcacgtcgccgcgtggccagcgccggcgccggggaag
cccatggagctcccgatcggcagtgccgcgctgcgcgtgcacctcccgcctgcagctgac
gacccgggtccgccgcccgcgctgctgcctgccaacccctcggtgccgtacgggctcttt
catgatgccgacctgtttgccgcgttccgtggcctacttctccacctatggacgctctgg
gagctcatggtggtcggcgagcctgtgctggtcgtcgcgccgtccccagctcagtgctcg
gaggctgtggctgggcttgttagccttgttgctccgcttttgtatagtgtggacttcagg
ccgtacttcactatccatgatccggattttgctcgcttgaatgtgcttgcagaaggcgag
gtcttcccgccaatggtgcttggagtgactaacctgtttttcttgaagagtcttaagagc
attcccaatgtcgtgtccgtgggaagccccaatccaaattcaacgagggtgctcccagtg
ggtggccaaacgccagggattggaacaaatgggacacccgggaagctcaagcttgacaaa
cttgcaatcaataagttctctcctactagcctattgaattccatcaaattgagaagagaa
ggccctctttctctcatgacagagcacaaggaagcgttatggagcacgtatgcgccaacc
acaaagcctgatacttctgttctaaataggctcgttgatgctggtgtgtcaccgaggatc
gaggagtccatgtcagtagtcaacaatgagatattgcgacggcatttcttggagctgacg
accaacttccttgcgccttttgggccatatctgagaactacaacaccatcagaagggact
tcaccttttgttgacccaccattgttaccaccatttcacgcggatgagtttgtcaatggt
ttggcagctagaggtccagggaagtttttgtccaaaaggatgagatccaattggttagat
ctgtataggagattccttgaaggccccaatttcatgccttggttccggcaaagacgtgct
gctgcagagcaagaacaacagaggctttggaggcaggctcgcatgaatgttgacattgaa
aagctagtgtcaaagatgtccgaattggagaggattgattcttttaatgctgttgagcgg
tatcttctcagagagatggagaactccggaagaggaagtgctgattcaatcgcagcatgc
cagaagctgaaaggagacctccgagcagcatttagcgtcttgccgaaggacatgcaacag
ctcctgctctccaatcctaaaagagctgttcttcttcaaggtagccaagaaaaggccccg
ggggccaacggcattgttacccagacaagtttatag
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