KEGG   Panicum virgatum (switchgrass): 120652955
Entry
120652955         CDS       T07260                                 
Name
(RefSeq) ubiquitin-like isoform X1
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03010  Ribosome
pvir04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    120652955
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120652955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pvir03011]
    120652955
   04121 Ubiquitin system [BR:pvir04121]
    120652955
Ribosome [BR:pvir03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    120652955
  Archaea
    120652955
Ubiquitin system [BR:pvir04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   120652955
SSDB
Motif
Pfam: Ribosomal_L40e ubiquitin Rad60-SLD SNAD1 Ubiquitin_2
Other DBs
NCBI-GeneID: 120652955
NCBI-ProteinID: XP_039786856
LinkDB
Position
9K:complement(60359148..60361309)
AA seq 139 aa
MQVFVKTLAGKTAILEVEGGDTVAAVKAKIQDKEGVAADEQRLILAGTQLEDGRTMADYG
IQKESTFHLELGLLGGCWWIEPNLRALVYNHNINKMICRKCYATLPPGARNCRKKKCGHS
NQLRRRKLGFFKGCFRFCT
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcaggtcttcgtgaagacgctggcggggaagaccgccatcctcgaggtcgagggcggc
gacaccgtcgccgccgtcaaggctaagatccaggacaaggaaggtgtcgccgcggacgag
cagcggctcatcttggcggggacgcagctggaggacgggcgcaccatggccgactacggc
atccagaaggagtccacgtttcacctggagcttggcctcctcggcggctgctggtggatc
gagccaaacctccgcgccctcgtgtacaaccacaacatcaacaagatgatctgccgcaaa
tgctatgctaccctgccccccggggccaggaactgccgcaagaagaagtgtggccacagc
aaccagctgaggcgaaggaagctggggttcttcaagggatgtttcaggttctgcacctga

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