Panicum virgatum (switchgrass): 120652969
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Entry
120652969 CDS
T07260
Name
(RefSeq) phosphoenolpyruvate carboxykinase (ATP)
KO
K01610
phosphoenolpyruvate carboxykinase (ATP) [EC:
4.1.1.49
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00010
Glycolysis / Gluconeogenesis
pvir00020
Citrate cycle (TCA cycle)
pvir00620
Pyruvate metabolism
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
Module
pvir_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
pvir_M00170
C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
120652969
00020 Citrate cycle (TCA cycle)
120652969
00620 Pyruvate metabolism
120652969
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120652969
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.49 phosphoenolpyruvate carboxykinase (ATP)
120652969
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Gene cluster
GFIT
Motif
Pfam:
PEPCK_ATP
AAA_24
Motif
Other DBs
NCBI-GeneID:
120652969
NCBI-ProteinID:
XP_039786874
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Position
9K:60519909..60532618
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AA seq
659 aa
AA seq
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MAAPNGLARIETHGKKQHENGVCHDDSAAPVRAQTIDELHSLQRKRSAPTTPIKDGAASP
FAAALSEEERHRQQMQSISASLASLTRETGPKVVKGDPARKGEAAANGAPPTPQKHHQHH
HPAAPTIAVSDSSLKFTHVLYNLSPAELYEQAIKYEKGSFITSTGALATLSGAKTGRSPR
DKRVVKDEAAAQELWWGKGSPNIEIDEHTFLTNRERAVDYLNSLDKVFVNDQFLNWDPEN
RIKVRIISARAYHSLFMHNMCIRPTDEELESFGTPDFTIYNAGQFPCNRYTHYMTSSTSV
DINLARREMVILGTQYAGEMKKGLFGVMHYLMPKRGILSLHSGCNMGKDGDVALFFGLSG
TGKTTLSTDHNRLLIGDDEHCWSDNGVSNIEGGCYAKCIDLSQEKEPDIWNAIKFGTVLE
NVVFDEHTREVDYTDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPV
SKLNLAQTMYHFISGYTALVAGTEDGIKEPQATFSACFGAAFIMLHPTKYAAMLADKMQK
YGATGWLVNTGWSGGRYGVGKRIRLPYTRKIIDAIHSGELLTANYKKTEVFGLEIPTEID
GVPSEILDPINTWTDKAAYKETLLRLAGLFKKNFEVFASYKIGDDSSLTDEILAAGPNF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgaacgggctcgcgcggatcgagacgcacgggaagaagcagcacgagaac
ggcgtgtgccacgacgacagcgcggcgccggtgcgcgcgcagaccatcgacgagctgcac
tcgctgcagcggaagcggtcggcgcccaccacgcccatcaaggacggcgccgcctcgccc
ttcgccgccgcgctctccgaggaggagcgccaccggcagcagatgcagtccatcagcgcg
tcgttggcgtccctgacacgtgaaaccgggcccaaagtcgtcaagggcgacccggccagg
aagggcgaggccgccgccaatggcgcgccgccgacgccgcagaagcaccatcagcaccac
caccccgccgcccccaccatcgccgtcagcgacagctccctcaagttcacccatgtcctc
tacaacctctcccccgccgagctgtacgagcaggcgatcaagtacgagaagggttcgttc
atcacgtccaccggcgcgctggccacgctgtccggcgccaagaccggccgctcgcccagg
gacaagcgcgtcgtcaaggacgaggccgccgcgcaggagctctggtggggcaagggctcg
cccaacatcgagatagacgagcacacgttcctgaccaaccgggagcgggccgtggactac
ctcaactccctggacaaggtgttcgtgaacgaccagttcctcaactgggaccccgagaac
cgcatcaaggtccgcatcatctccgccagggcgtaccactccctcttcatgcacaacatg
tgcatccggcccacggacgaggagctggagagcttcggcacgccggacttcaccatctac
aacgccgggcagttcccctgtaaccgttacacgcactacatgacgtcgtcgacgagcgta
gacatcaacctcgctaggagggagatggtgatcctgggcacgcagtacgccggggagatg
aagaagggcctcttcggcgtcatgcactacctcatgcccaagcgcggcatcctctcgctg
cactccggctgcaacatgggcaaggacggtgacgtcgccctcttctttgggctctcaggc
accgggaagacgacgctgtcgacggatcacaataggcttctgatcggtgacgacgagcac
tgctggagcgacaatggcgtctccaacatcgagggcggttgctatgccaagtgcatagac
ctgtcccaggagaaagagcctgatatttggaacgcaatcaagtttggaactgttctggag
aacgtcgtcttcgatgagcatactcgtgaagttgactacaccgacaaatctgtcaccgag
aacacccgggctgcctacccgatcgagtacatccccaacgccaagatcccctgcgtcggc
ccccaccccaagaacgtcatcctcttggcgtgcgacgcgttcggcgtgctcccgcccgtc
agcaagctgaacctggcgcagaccatgtaccacttcatcagcggctacaccgccctggtc
gccggcacggaggacggcatcaaggagccgcaggccacgttctcggcctgcttcggcgcg
gcgttcatcatgctccacccgaccaagtacgccgccatgctcgccgacaagatgcagaag
tatggcgccaccgggtggcttgtcaacaccggctggtccggcggcaggtacggtgtgggc
aagaggatcaggctgccctacacccggaagatcatcgacgccatccactccggcgagctc
ctcaccgccaactacaagaagaccgaggtttttgggctcgagatccccaccgagatcgac
ggcgtgccgtcggaaatcctcgacccgatcaacacctggacggacaaggccgcgtacaag
gagacgctcctgaggctcgccggcctcttcaagaagaacttcgaggtgttcgccagctac
aagatcggggacgacagcagcctgaccgacgagatcctcgccgcaggccccaacttctga
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