Panicum virgatum (switchgrass): 120653399
Help
Entry
120653399 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 16-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120653399
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120653399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120653399
NCBI-ProteinID:
XP_039787086
LinkDB
All DBs
Position
1N:complement(19739236..19741065)
Genome browser
AA seq
398 aa
AA seq
DB search
MEAPLLAAATGTGKKIGAGEEGSLAVREVKKQMYLAGPLVAGFLLQNLIQMVSVMFVGHL
GELALASASIATSFASVTGFSLLVSISRCPSLFILSFLSSRIRFTDRRCPRQAGMACSLD
TLCGQAFGARQHRMLSVYKQRAMLVLALVSVPVAAVWAYTGEILAWCGQDPEIAAGAGSY
IRWMIPALFVYGALQCHVRFLQTQNLVVPVMLGSGATALCHPAVCWVLVRGLGLGRNGAA
LANAISYLANLSLLALYVRLAPSCRTTWTGFSAEAFRGVPDFPKLAVPSACHGLVLRFFN
SSIPKRRSLGPAEADRFSEKMGTHGEIHNDNVIKATMEELTEEERKAYLIAEEHLKEQFL
QGFKKERGGLFKRVGEFVMPSFKLNQDKVKIRKYLLRK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgccgctcctcgccgcagcgacggggacgggaaagaagatcggagctggtgag
gaggggagcctggccgtgcgcgaggtcaagaagcagatgtacctcgccggaccgctcgtc
gccgggttcctcctgcagaacctaattcagatggtctccgtcatgtttgtcggccacctc
ggcgagctcgcgctggccagcgcctccatcgccacctccttcgccagcgtcacgggcttc
agcttgctggtgagcatctcccgctgcccctctctctttatcctctcgtttctgtccagc
cggatccggttcaccgaccggcggtgtcctcgtcaggcaggcatggcgtgcagcctggac
acgctgtgcgggcaggccttcggcgcgcggcagcaccgcatgctcagcgtctacaagcag
cgcgccatgctggtgctcgcgctagtgagcgtcccggtggcggcggtctgggcctacacc
ggcgagatcctcgcgtggtgcggccaggacccggagatcgccgccggggccggcagctac
atccggtggatgatccctgcgctgttcgtgtacggggcgctgcagtgccacgtccgattc
ctgcagacgcagaacctcgtcgtgccggtgatgctcggctccggcgccaccgcgctgtgc
cacccggccgtctgctgggtgctggtgcgcgggctcggcctcggccgcaacggcgccgcg
ctggctaacgccatctcctacctcgccaacctctccctcctggcgctctacgtccggctc
gcgccgtcctgcaggaccacctggacgggcttctccgccgaggcgttccgcggcgtcccc
gacttccccaaactcgccgtgccgtccgcctgtcatggtctggtactgagattcttcaat
tcttccattcccaaacggagaagcttgggacctgctgaggccgaccgattctctgagaag
atgggtactcatggtgaaatccacaacgacaacgtcatcaaggcgaccatggaggagctc
actgaagaggagcgcaaagcctacctcatcgctgaagagcacctgaaggagcagtttctt
cagggattcaagaaggagcgaggaggcctattcaagagggtcggggagttcgtgatgcca
tcattcaagttaaaccaagacaaggtcaagattcgaaaatatctgctgcgcaagtag
DBGET
integrated database retrieval system