Panicum virgatum (switchgrass): 120653457
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Entry
120653457 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120653457
KO
K10523
speckle-type POZ protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120653457
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120653457
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retrotrans_gag
Ty3_capsid
Gag_p24_C
DUF4197
Motif
Other DBs
NCBI-GeneID:
120653457
NCBI-ProteinID:
XP_039787140
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All DBs
Position
1N:complement(32330867..32331850)
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AA seq
327 aa
AA seq
DB search
MAALPIASPALQPASTDGQQIDWASKIAEVMRDQFGLKPKLQNLMYRNSYPAVYDQLPLP
HKYKFPDFTKFSGQGVVSTVEQINRFIIQCGEEAQNDALKVRLFSMSLSGSAFTWFTTLP
SNSIIFWADLEKQFHQLFYSSIEKMKLPDLTNLRQRNDESVTTFIQRFRVVKNRCFSLVM
SDQQLAEVAFQGLLQHIKEKYACQEFYSISQMAHRMTGEVKPYEQKRSNFQKKVNFVDYS
DASDSDDDQMVESAEWVQNNKKPIACPFGNKEPEKYWFDITKADKIFDLLLSEGQIKLKP
YHKISTDQVLKNIKYCKWHNATSHDTN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcagctttgccgatagcttcaccagcactacagccagcatcaactgatggtcagcag
attgactgggcatccaagattgctgaagtgatgagggatcaatttggcttgaagccaaag
ctgcaaaatctgatgtacagaaattcatatccagctgtgtatgatcaactgccgttgccc
cacaagtacaagtttccagatttcaccaagttttctggacaaggggtggtctccacagtg
gaacaaatcaacagattcatcatacaatgtggtgaagaagctcagaatgatgcgttgaaa
gtgcgtctattctctatgtctctctctggatcggcttttacatggttcacaacgttgcca
tccaactctataatattctgggctgatttagagaagcagttccaccagttattctactct
agtatagagaagatgaagttgcccgatctgaccaacttaagacagaggaacgatgaatcg
gtcactaccttcattcagaggttcagagttgtcaagaatcggtgctttagtttggttatg
tctgatcagcagcttgcagaagttgctttccaaggactcttgcaacacatcaaggagaag
tacgcttgccaagagttctatagcatcagtcagatggctcacaggatgacaggggaggtc
aaaccatatgagcagaagagaagcaactttcagaagaaagtcaattttgttgactactca
gatgcttccgactcagatgatgaccagatggtggaatcggccgaatgggttcaaaacaat
aagaagccgatcgcatgtccgtttggtaacaaggaacctgagaaatattggtttgatatt
accaaggctgataagatcttcgacctattgctgtcagagggacagattaagctgaagccg
tatcacaagatttcgacagatcaagtgttgaagaacatcaagtattgcaagtggcacaat
gcgacatctcatgatacaaattga
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