Panicum virgatum (switchgrass): 120653788
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Entry
120653788 CDS
T07260
Name
(RefSeq) synaptotagmin-2-like
KO
K28063
extended synaptotagmin
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120653788
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
120653788
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMP_MUG190-like
C2
PDZD8_N
MMM1
Motif
Other DBs
NCBI-GeneID:
120653788
NCBI-ProteinID:
XP_039787392
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All DBs
Position
1N:complement(66478094..66482555)
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AA seq
627 aa
AA seq
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MLTPSAGILPSPPSPSAARCLPVPRAAASPSPSPSKRSTPLPTTSLPPETSQLTRPFTPY
PEAAEDPLVSKLRTLGVIHPLPAPPVSRSVVALFFFVGAAFDKLWTLRKRRRAERELKIN
GSWPQVPTSSFSLFLEDKDLQRKESVEWVNMVLGKLWKVYRTGIENWIVGLLQPVIDNLH
KPDYVNRVEIRQFYLGEEPLSVRNVERRTSRRANDLQYQIGIRYAGGARMALALSLKFTK
VPVVVPVWVRDFDIDGELWVKLRLIPTEPWVGAVSWAFVSLPKIKFELSLFRLFNLMAIP
VLSINYYWRIYSPCNWFLTKLLTEDLPRLFVRPKKIVLDFQQGRAMGPVSGSVASDIIQD
GNKDFVGELSVTLVDARKLSFVLFGKTDPYVVMILGDQVIKSKKNSQTTVIGLPGEPIWN
QDFHLLVGNPRKQKLTIQVKDSIGLTDITIGTGEVELGSLKDTVPTDKIVTLYGGWGLFG
KRTAGEVLLRLTYKAYVEDEEDEAVRSEFAGGYVSDEDVLDYVQGDMSKGSDFLGKERET
FMDLLAALLVSEEFQGIVSSETGSSRDPEQAGSGSGSTNSIVSPAAADAETVSNSSTDNT
ALVWLAAITSVMVLVSSNFGASGYFNP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccccctccgccggcatcctgccgtcgcctccctccccctccgctgctagatgc
ctgcccgtccccagagccgccgcctccccctccccctccccctccaagcgctccacgccg
ctacctaccaccagcctcccgcccgagacctcccaactcacccgccccttcacgccctac
ccggaagcagcggaagaccccctcgtctccaagctccgcaccctcggcgtcatccacccg
ctccccgcgccccccgtcagccgctccgtcgtcgccctcttcttcttcgtcggcgccgcc
ttcgacaagctctggacgctgcgcaagcgccgccgcgccgagcgcgagctcaagatcaac
ggctcatggccgcaggtccccacctccagcttctccctcttcctcgaggacaaggacctc
cagcgcaaggagtccgtcgagtgggtcaacatggtcctcggcaagctatggaaggtctac
cgcacaggaatcgagaactggatcgtcggcctgctccagccagtcatcgacaacctccac
aagcccgattacgtcaacagggtcgagatcaggcagttctacctcggcgaggaaccgctc
tccgtcaggaatgtcgagcgccggacctcaaggcgggccaacgacctgcagtaccaaata
ggcattcgctatgccggtggagcacgcatggctctggcgctctccctaaagtttacaaaa
gtaccagtcgtcgtgccagtttgggttcgagatttcgacattgatggggagttgtgggtt
aagctaaggctcataccaacagaaccatgggtgggagctgtatcttgggcttttgtatcc
cttccaaagattaagtttgagctgtcactgttccgcctattcaatcttatggctattcct
gttctgtcaatcaattactattggcgcatttattctccttgtaattggtttctcacaaaa
cttctgacagaagatttgccacgtctctttgtgcggcccaagaagatagtcctagatttt
cagcagggaagagctatgggacctgtttcaggaagtgttgcaagtgacataattcaagat
ggaaacaaggactttgttggagaactatcagtgacgctagttgatgctagaaagcttagt
ttcgtcctatttggcaagacagacccttatgttgtcatgattcttggtgaccaagtcata
aagagcaagaagaacagtcaaacaactgtgattgggctaccaggagaaccaatttggaat
caagattttcatctgcttgtaggaaatcctcgcaaacagaagttgaccattcaagtgaag
gattcaattggtctaactgacatcactattggcactggggaggttgagttggggtcactt
aaagatacagttccgactgacaaaattgtaactttatatggcgggtggggcttgttcggg
aaacgaacagctggggaagtgctacttcggctgacatacaaggcatacgtcgaggacgag
gaagatgaggcggtgcgaagcgagtttgctggcggttacgtctcagacgaggatgtgctg
gattatgtccaaggtgacatgagtaagggcagcgactttttgggtaaagaaagagaaaca
ttcatggatctgcttgctgcactgcttgtcagtgaggaattccaaggtatagtgtcttcg
gaaacgggaagctcaagagatcctgagcaggcgggcagtggatctggaagcactaacagc
atagtctctcctgcggcagctgatgctgagactgtatctaatagctccacagataatacg
gctctagtgtggctcgcggccataacaagtgtgatggtgctcgtgtcctccaactttggt
gcttcaggctacttcaacccttga
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