Panicum virgatum (switchgrass): 120653816
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Entry
120653816 CDS
T07260
Name
(RefSeq) transcription factor bHLH94-like
KO
K28356
basic helix-loop-helix transcription factor family protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120653816
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
120653816
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
120653816
NCBI-ProteinID:
XP_039787425
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Position
1N:complement(61981417..61983393)
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AA seq
345 aa
AA seq
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MALEAVVFPKEHLACTGKVGVAAHSASLGCGFDIDDLEEKGGVVLQVEAAGALPLGAGAV
TAWDAALCPCSVAPSAGGEECCWDVQRHLSVSPPPVPAVAAQGGRGKAVASAARRRRRRP
KAVKNTEEMESQRRNHIAVERNRRRQMNEYLAVLRSVMPPSYAQRGDQASIVAGAINFVK
ELEQLLQSLEAQKRRAGCTERTPPAPPFAGFFTFPQYSTGATGAVGASDSSDCSAGGDQG
GGGCAGARRGVADIEVAVADSHANVKVLAPRRPRQLLRMVVALQCLGLTVLHLNVTTTAD
HLAFYSFSLKMEDECRLSSVDNIAAAVNEIVATVSDEVIISQLAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgaagccgtggtgttcccgaaggagcacctcgcgtgcacgggcaaggtgggc
gtggccgcgcactcggcgtcgctgggatgcggtttcgacattgatgacctcgaggagaag
ggcggcgtggttctgcaggtagaggccgccggcgcgctgccgctcggtgccggtgcggtc
accgcatgggacgcggcgctctgcccgtgctccgtcgctcctagcgctggcggggaggag
tgctgctgggacgtgcagcgccacctctccgtgtcgccgccgccggtgcccgcggtagcg
gcgcagggggggcgcggcaaggcggtcgcgtcggcggcgcggaggcggcgacggcgcccg
aaggcggtgaagaacacggaggagatggagagccagcgccgcaaccacattgccgtggag
cgcaaccggcggcggcagatgaacgagtacctcgccgtgctccgctccgtcatgccgcct
tcctacgcgcagcggggtgaccaggcgtcgatcgtggcgggcgccatcaacttcgtcaag
gagctggagcagctgctgcagtcgctggaggcgcagaagcggcgcgcgggctgcaccgag
cgaacgccgccggcgccgccgttcgccggcttcttcacgttccctcagtactcgaccggc
gcgaccggtgctgtcggcgcgagcgatagttctgactgctctgcgggcggcgatcagggc
ggcggcggctgcgcgggggcgcgccgcggcgtggccgacatcgaggtggccgtggcggac
agccacgccaacgtgaaggtgctcgcgccgcggcggcccaggcagctgctgaggatggtg
gtggcgctgcagtgcctcggcctcaccgtgctccacctcaacgtgaccaccaccgccgac
cacctggccttctactccttcagcctcaagatggaggatgaatgccggctatcgtcggtc
gacaacatcgccgccgcggtgaacgagatcgtcgcgacggtctccgacgaggtcatcatc
agtcagttagctgagtag
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