Panicum virgatum (switchgrass): 120653840
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Entry
120653840 CDS
T07260
Name
(RefSeq) cytoplasmic tRNA 2-thiolation protein 1-like isoform X1
KO
K14168
cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
120653840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120653840
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
120653840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP_bind_3
zn-ribbon_14
tRNA_Me_trans
Motif
Other DBs
NCBI-GeneID:
120653840
NCBI-ProteinID:
XP_039787452
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All DBs
Position
1N:complement(62156483..62159828)
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AA seq
363 aa
AA seq
DB search
MGSSVADGAKLQPSRAGSRLCVLCGERKAALKRPKTLEQICRECFYIVFEDEIHQTIVDN
SLFKGGERVAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVK
RNEIQYGLPLKIVSYKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKADKIV
TGHNADDIAETVLLNILRGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVMYAYFKK
LDYFSTECIYSPNAYRGFAREFIKDLERMRPRAILDIIKSGENFRISTTTKMPEQGKCER
CGYISSQRLCKACVLLDGLNRGLPKLGIGRTNAGSGAGDSKERAKHSERNTSSLQGKHGN
FDF
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgggcagctccgtagctgacggcgctaagctacagccatcaagggcagggagtcggctc
tgcgtgctgtgtggcgagaggaaggccgcactgaagcgacccaaaaccctagagcagatc
tgcagggaatgcttctacatcgtctttgaggacgaaattcatcaaactattgtcgacaat
tctctgtttaaaggtggtgagcgtgtggcaatcggtgcttctggtggaaaagattcaaca
gtacttgcatacgtgctatcggagttaaaccgtcgtcacaactatggcctcgatttgttc
cttttatctgttgatgaaggaatcacaggctatagagatgactcactagaaacagttaaa
aggaatgaaatacagtatggtctgccactgaagattgtttcctataaagacctctatggc
tggacaatggatgatattgttaaagcaattggtctgaaaaataattgtactttctgtgga
gtttttcgacgtcaggcattagatcgaggtgctgctctcctaaaggctgataagattgta
actgggcataatgcagatgacattgcagaaactgtcttgctgaatattctgcgtggtgat
attgcaaggttaagtagatgtacctttataactactggtgaagatgggccaatcccaaga
tgcaagcctttcaaatacacctacgagaaggagattgtcatgtacgcttacttcaaaaag
ctggactacttctccacagaatgcatctattcaccaaatgcataccgtggttttgctcgt
gaatttattaaagatttagaaagaatgaggcctagagctatattggacatcataaaatct
ggagaaaatttcagaatctccacaacaacaaagatgccagagcaaggaaagtgtgaacgc
tgtggctacatttctagtcagagattatgcaaagcgtgtgttttgttggacggattgaat
cgaggcttgccgaaactaggcattggaaggaccaatgctggttctggagctggcgacagt
aaggaacgcgccaaacattcagagaggaatacatcgagcttacaagggaaacatgggaac
ttcgacttctag
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