Panicum virgatum (switchgrass): 120653855
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Entry
120653855 CDS
T07260
Name
(RefSeq) photosystem I chlorophyll a/b-binding protein 5, chloroplastic-like
KO
K08911
light-harvesting complex I chlorophyll a/b binding protein 5
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00196
Photosynthesis - antenna proteins
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
120653855
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pvir00194
]
120653855
Photosynthesis proteins [BR:
pvir00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCI
120653855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chloroa_b-bind
HliA
Motif
Other DBs
NCBI-GeneID:
120653855
NCBI-ProteinID:
XP_039787474
LinkDB
All DBs
Position
1N:complement(62385323..62387519)
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AA seq
262 aa
AA seq
DB search
MASIVTAANSHWGALHTCTASSRALTGWSRRALSVPSAHRVRSPRARVVVRASAQRATWL
PGLDPPAHLDGTLPGDFGFDPLGLGEEPAALKWYVQAELVHCRFAMAGVAGILVTDLLRV
SGIRDLPVWFEAGAAKFDFANTTSLFFVQLLLMGFAETKRYMDFINPGSQAEEGTFIGLE
AALVGSQPGYPGGPLFNPLGLAKDIENAHEEKLKEIKNGRLAMVAMLGFIVQASVTHVGP
IDNLLTHLSDPFNKNIIHAISS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccattgtaacagcagctaacagccattggggagccctgcacacctgcacagcc
tcctcaagggcgctcactggttggagccggcgcgcgctctccgtgccatcagcacaccgc
gtgcggtcgccgagagctcgggtcgtcgtccgagccagcgcccagcgcgcgacctggttg
cccgggctggacccgcctgctcacctcgacggcacgctaccgggtgacttcggcttcgat
cccctggggctcggggaggaaccggctgccttgaagtggtacgtgcaggccgagctcgtg
cactgccggttcgccatggcaggggtcgccggcatccttgtaaccgacttgcttcgcgta
tcagggatccgggatctaccagtgtggttcgaggcaggtgcagccaaatttgacttcgcc
aacaccacgtcactcttcttcgttcagcttctcctgatgggattcgctgaaaccaagagg
tacatggatttcatcaatccgggatcacaagcagaggaaggaaccttcataggcctagag
gctgcactcgtgggctcacagccaggctacccaggaggtccactgtttaatccgttagga
ctcgcaaaagatatagagaatgcacatgaagagaagctgaaagaaatcaagaatgggagg
ttggcaatggtagccatgctaggcttcattgtgcaagcatcagtaactcatgttggcccc
atcgacaaccttttgacacatctttccgacccattcaacaaaaatatcattcacgcaatc
tcttcctga
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