Panicum virgatum (switchgrass): 120654092
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Entry
120654092 CDS
T07260
Name
(RefSeq) SNAP25 homologous protein SNAP33-like
KO
K18211
synaptosomal-associated protein 25
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120654092
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-25
120654092
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
DUF4472
DUF5089
Motif
Other DBs
NCBI-GeneID:
120654092
NCBI-ProteinID:
XP_039787603
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All DBs
Position
1N:42824494..42825407
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AA seq
201 aa
AA seq
DB search
MPRGAKPAASSKPNPFDSDSDSESQPAKKSSGAYQAPADAKKRYKDGFRDAGGLENQSVE
ELEHYAAYKAEETTDALAGCLRIAEDIKQDATDTLITLHKQGEQISRTHEKAVEIDQDLT
KSETLLGSLGGFFSKPWKPKKTRKIKGPAEVSRDDSFKKKASRMEQRDKLGLSPRGKNAN
RQYGEATSAMDKVQVRQCSAR
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcggcgccaagcccgcggcttcgtcgaagccgaaccccttcgactccgactcc
gactccgagtcccagcccgcgaagaagtcctcgggcgcgtaccaggcccccgccgacgcc
aagaagcggtacaaggacgggttccgcgacgccggcgggctggagaaccagtcggtggag
gagctcgagcactacgcggcgtacaaggccgaggagaccaccgacgcgctcgccggctgc
ctgcgcatcgccgaggacatcaagcaggacgccaccgacacgctcatcacgctgcacaag
cagggggagcagatcagccgcacgcacgagaaggccgtcgagatcgaccaggacctcacc
aagagcgagacccttctcgggagccttggagggttcttctccaagccatggaagcccaag
aagacgaggaagatcaagggacctgccgaggtgtctcgagatgactccttcaagaagaag
gcgagccgcatggagcagagggacaagctggggctgagcccccgaggcaagaacgccaat
cgccagtacggcgaggccaccagcgccatggacaaagttcaggttcgtcagtgctctgcg
cgctaa
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integrated database retrieval system
