Panicum virgatum (switchgrass): 120654164
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Entry
120654164 CDS
T07260
Name
(RefSeq) exocyst complex component SEC15A-like
KO
K19985
exocyst complex component 6
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120654164
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Tethering complex
Exocyst complex
120654164
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120654164
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sec15_C
EXOC6_Sec15_N
COG2_N
Motif
Other DBs
NCBI-GeneID:
120654164
NCBI-ProteinID:
XP_039787646
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Position
1N:52381104..52383473
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AA seq
789 aa
AA seq
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MSAPPKKRTIVETGDGGLGLGIAAFITNGEDLGPIIRHSFESGKPEALMQNLRSIVKKKE
VEIEELCRLHYEDFIVAVDELRGVLVDAEELKGMLSGENSHLQEASTTLLFKLDELLEIY
SVKKNVGEAITTLKICVKVISLCMTCNNYIAEAKFHPALKTLDLIQKGYLNSIPLKLLKK
VVARQIPLIKLHIEKKVCSEFNDWLVHIRRMAKQIGQVSINQASLARQKDEEMRARQREA
EGHSHAGPDAHFYSLNLENKEEESALDFDVTPVYRAHHMHICLGIGEKFRDYYYKNRLMQ
LNLDMQISTSQPFLESHQPFLSQVAGFFIVEERVLRTADGLLSESQVETTWETAISKITS
ILEEQFSRMRTASHFLLIKDYITLLGAAVNKYGYQITQLIEVLEKSRDKYHQLLLLECRK
QIDDILTNDSYEQMVIKKGYEYNMNVTAFHLEHDDLIPDFPYVAPFSSSVPEVCRIVRSF
IEDSVSYLSYGGLMNIYDVVKVYLDRLLIEVLNDSLLNMIYARSLAMSQMMQLAGNISIL
DQACDMYLLHSAHLCGIPKRVAERSHSGLTARAVLKASQNAVYNSLINLANFKVDEFMVL
LENVNWITEEAPDDANDYMNEVLIYLETLVSTAQSILPLEALYKVVSGAITHISDSIMTT
LLNDGVKRFTVNAVLGLDIDLKMLEAFADEKFDTTGLSDLGKETTFRDCLVEIRQLVNLL
LSSQPENFMNPVIRQRNYGSLDYKKVAIVCDKYKDSADSLFGSLSNRNVKQNARKKSMDV
LKRRLKDFS
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctccaccaaagaagaggactatagtggaaactggagatggaggtcttggtttg
ggcattgctgcatttattacaaatggtgaggatttaggtcccatcattcgccattcattc
gaatctgggaaacctgaagctctcatgcaaaatcttagaagtattgtgaagaagaaggaa
gttgagattgaagagctatgtagacttcactatgaggatttcatcgttgctgtcgatgaa
ctacgtggtgtgttggtcgatgctgaggagctgaaggggatgctctctggtgaaaattct
cacctgcaggaggcttctaccaccctactgtttaagcttgatgaacttcttgagatatat
tctgtcaagaaaaatgtaggggaggccataacaacactgaagatttgtgtcaaggtcatc
agcttgtgcatgacttgcaacaattatattgcagaagctaagtttcatcctgcactgaag
actttagatctgatccagaagggctacttgaatagtattcctttgaagcttcttaaaaag
gtggtggcgagacagataccattgataaagctgcacatcgagaagaaagtttgtagcgag
ttcaatgattggcttgttcatatcagaagaatggccaagcaaattggccaggtctcaata
aaccaagcttccttagcgcgccagaaagatgaggaaatgcgagcccggcagagagaagct
gaagggcatagccatgctggaccagatgcgcatttttattcattaaatttggagaataaa
gaagaagaatcagcattagattttgatgtcacaccagtgtatcgggcacatcacatgcac
atatgtcttggtataggggagaagttcagagactattactacaagaataggctcatgcaa
ctcaacttggacatgcagatttccacttcacagcccttcctggagtcccatcaacccttc
ctttctcaggtagctggattttttatcgttgaagaacgtgttcttcgaactgcagatgga
ttgttgtctgagagccaagtggaaacaacatgggagacagctatttccaagataacatct
atattggaggagcagttctcacgcatgcgtactgccagccacttcctcctcataaaagac
tatatcactcttctaggtgcagctgttaacaagtacggttatcaaatcacacagttgatt
gaagttcttgagaaaagtagggacaaataccatcaattgcttcttcttgagtgtcggaag
cagatagatgacatcctcactaatgactcgtatgaacaaatggttataaagaagggatat
gagtataacatgaatgtgacagcatttcatctggaacacgatgatttgatccctgatttt
ccatatgtggcaccattctcctcttctgttccagaagtttgtcgtatagttcggtccttc
atcgaggattccgtcagctacttgtcatatggtggtctcatgaacatctatgatgtggtg
aaagtgtacctagacaggctgttgattgaggtattgaacgacagtcttctgaacatgata
tatgctcgctcgctagcaatgtcacagatgatgcaacttgctggtaacatatctattctt
gaccaggcttgcgatatgtacctcttgcactctgcccatttgtgcggcattcccaagcga
gttgctgagaggtctcattctggtttgactgctcgagctgtgctaaaagcctcacagaat
gcagtgtataattctctaattaacctagccaatttcaaggttgatgagtttatggttctt
ttggaaaatgttaactggatcacggaggaagccccagatgatgcaaatgactacatgaat
gaggtcctgatctatcttgaaacgttagtatcaacagcccagtcaattctacctttggaa
gctctatacaaggtggtttctggtgcaattacccacatctcagactctataatgacaaca
cttctaaacgatggtgtgaaaaggttcactgtcaatgcagttttaggacttgatatcgac
ttgaaaatgctggaggcatttgcagatgagaaatttgacaccacgggtctatcggatttg
ggcaaggaaacaactttcagagattgtttggttgaaattaggcagcttgtcaatcttctg
ctcagtagccaacccgagaactttatgaatccggttataaggcagaggaactatggatca
ctggattacaagaaggtggccatcgtttgtgacaagtacaaggattctgcagactccctg
tttgggagcctttcgaaccgcaatgtgaagcaaaatgctcgtaagaaatctatggatgtt
ttgaagagaaggcttaaggattttagctaa
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