Panicum virgatum (switchgrass): 120654262
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Entry
120654262 CDS
T07260
Name
(RefSeq) vesicle-associated membrane protein 711-like
KO
K08515
vesicle-associated membrane protein 7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120654262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120654262
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120654262
Membrane trafficking [BR:
pvir04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
120654262
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120654262
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
Motif
Other DBs
NCBI-GeneID:
120654262
NCBI-ProteinID:
XP_039787711
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Position
1N:65027357..65028781
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AA seq
222 aa
AA seq
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MGKIEYAVVARGAVVLAEHGAAGSNAGAVARQVLERLPGGGNDCNVSYTQDLHVFHVKRT
DGITALCMADDAAGRRIPFAFLADVHGRFVETYGRAALTALAYAMNDDFSRVLSRQMEYY
STDPNADSMTRMRGEIDQVRGIMLDNIDKVLERGDRLELLVDKTATMEGNTMRFKRQARR
FRNTMWWRNAKLTAAVIFILTVIVYLVLAYLCHGFTLPSCVP
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagatcgagtacgccgtggtggcgcgcggcgcggtggtgctggcggagcacggc
gcggcgggcagcaacgcgggcgccgtggcgcggcaggtcctggagcgcctccccggcggc
ggcaacgactgcaacgtctcctacacgcaggacctccacgtgttccacgtcaagcgcacc
gacggcatcaccgcgctctgcatggccgacgacgccgccgggcgacggatccctttcgcg
ttccttgctgatgtccacggacgatttgtcgagacgtacggccgtgccgctctcacggcg
ctcgcgtatgcgatgaacgacgacttctccagggttttgagccggcagatggaatactac
tccaccgaccccaacgcggacagcatgactcgcatgagaggtgaaatcgatcaggtccgg
ggcatcatgctcgacaacattgacaaggtactcgagcgaggtgaccgtctggaactgctg
gtggacaagactgcaacaatggagggaaacacgatgcgctttaaacggcaagctcgccgg
ttcaggaacaccatgtggtggagaaatgcgaagctcacagctgcagtaatattcatcctc
acggtgatagtgtacctggtgctcgcctacctgtgccacggattcaccctaccgtcctgc
gtcccgtaa
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