Panicum virgatum (switchgrass): 120654267
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Entry
120654267 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 35-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120654267
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120654267
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120654267
NCBI-ProteinID:
XP_039787714
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Position
1N:66115900..66118068
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AA seq
514 aa
AA seq
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MGGYAEPLLFSSRSPRVGGHSSNSMVVALHDDELDDGDAPPVRSARAAWAVFAEESRRLW
AIGAPIAFNIICLYGTNSTTQIFAGHIGNRELSAVAIGLSVVSNFSFGFLLGMGSALETL
CGQAFGAGQVAMLGVYMQRSWIILSASALLLTPLYVYAAPVLRLLGQDDDMAAAAGSFTL
AIIPQMFALAVNFPTQKFLQAQSKVAVLAWVGFAALAAHVGLLALFVSVLGWGVAGAAAA
YDVSSWLTSLAQVAYVVGWCRDGWTGLSRAAFQELWAFVKLSLASAVMLCLEIWYMMVLV
VLTGHLDDAEIAVDSISICMNINGWEGMLFIGLSAAISVRVSNELGSGRPRATKYAVMVV
LAQSLAFGLLAMLLILATRSQFPVIFTGDRHLQKAVSNIAYLLAVTMVLNSIQPVISGVA
VGGGWQAVVAYINLGCYYAFGLPLGFIFGYLLRLGVQGIWAGMLCGTALQTAILTYMVWR
TDWKAEASLALERVRIWGGQHHQKLPTSDQDVVI
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgggtggctacgcggagcccctgctcttcagcagccgcagcccgcgcgtcggcggccac
agcagcaacagcatggtagtcgcgctgcacgacgacgagctcgacgacggcgacgcgccg
ccggtgcggtcggcgcgcgccgcgtgggcggtgttcgccgaggagtcgcggcggctctgg
gccatcggtgcgcccatcgccttcaacatcatctgcctctacggcaccaactcgacgacg
cagatcttcgcgggccacatcggcaaccgcgagctctccgccgtggccatcggcctctcc
gtcgtctccaacttctccttcggcttcctgctcggcatgggcagcgcgctcgagacgctc
tgcggccaggccttcggcgccggccaggtggccatgctcggcgtctacatgcagcgctcc
tggatcatcctctccgcctccgcgctcctgctcacgccgctctacgtctacgccgcgccc
gtcctgcgcctgctggggcaggacgacgacatggccgccgccgcggggagcttcacgctc
gccatcatcccgcagatgttcgcgctcgccgtcaacttccccacgcagaagttcctgcag
gcgcagagcaaggtggcggtgctcgcctgggtgggcttcgccgcgctcgccgcgcacgtc
ggcctcctggcgctcttcgtgtccgtgctcggctggggcgtcgcgggggccgccgccgcc
tacgacgtctcgtcctggctcacctcgctggcgcaggtggcctacgtcgtgggctggtgc
cgggacggctggacggggctgtccagggccgcgttccaggagctctgggccttcgtcaag
ctctcgctcgcgtccgccgtcatgctctgcctcgagatctggtacatgatggtgctcgtc
gtgctcacggggcacctcgacgacgcggagatcgccgtcgactccatatccatctgcatg
aacatcaacggctgggagggcatgctgttcatcggcctcagcgccgccatcagcgtccgc
gtgtccaacgagctcgggtccgggcgcccccgggccaccaagtacgcggtcatggtggtg
ctggcgcagtcgctggccttcgggctcctggccatgctcctcatcctggccacccggtcg
cagttcccggtcatcttcaccggcgaccgccacctgcagaaggccgtctccaacatcgcc
tacctgctggccgtcaccatggtgctcaacagcatccagcccgtcatctcgggcgtcgcc
gtcggcggcggctggcaggccgtggtggcctacatcaacctcggctgctactacgccttc
ggcctcccgctcggcttcatcttcggctacctcctcaggctcggcgtgcagggcatctgg
gcggggatgctctgcggcaccgcgctgcagacggcgatactcacatacatggtctggaga
acagactggaaagcagaggcgtcgctggcgttggagagagtcagaatatggggtgggcag
catcatcaaaagcttcctacctcggatcaggacgtggtcatctag
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