Panicum virgatum (switchgrass): 120654401
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Entry
120654401 CDS
T07260
Name
(RefSeq) mannosyltransferase APTG1-like
KO
K05286
GPI mannosyltransferase 3 [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
120654401
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120654401
Glycosyltransferases [BR:
pvir01003
]
GPI-anchor biosynthesis
Core oligosaccharide
120654401
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_22
Motif
Other DBs
NCBI-GeneID:
120654401
NCBI-ProteinID:
XP_039787858
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Position
1N:943888..949206
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AA seq
549 aa
AA seq
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MSQRRRSRAAGSPPGDADPPPSPEKALPLRIRPWPALGSDRRVLALALAFRAANALLVRT
YFNPDEHWQCLEVAHRVAFGYGHLTWEWKRGLRSYLHPLIFAALYKILALLRLDTPWFMV
MAPRLLQSVFAAFGDLYLYKLSKRIFSVQVAQWTLFSQLVNWFMFFCITRTLSNSLETVL
TVAGLHYWFTAIESSKGTSVVSKHQAASKQSHPSRKLALLIAALSCAIRPTSAVTWLYVG
LLDFIQMKCKCRFVFLEVIPVGAIVLAVTTLLDWWMYGSQVIVPLNFLKFNLFSSGGDYY
GTHVFHWYFTQGFPSMIWTFLPLAICGIVKSREWRISGLITWVLGVYSILGHKEFRFVLP
VLPLALMFSGYCLAAMSQFKGKKLHEKRCLSRLQISVILLIITNIPMAFYMLLFHQRGTE
DVMYYLSKEAHDGRVKSVLFLMPCHSTPYYSTLHYNIPMRFLDCTPSDSKGTLDESDRFL
TSPSEFVGEVFGNLSSFSHIVLFESEERHVLHLLLRNSFLEVRRYFHSHFKVDRDLQSSV
VVYSQRDVL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcgcaggcgatctcgggctgccggctcaccgcctggcgacgcagatccgccg
ccttcgccggagaaggcgctgccgctgcggatccggccgtggccggcgctggggtcggac
cggagggtgctggcgctcgcactggcgttccgcgcggccaacgcgctgctggtgcgcacc
tacttcaaccccgacgagcactggcagtgcctcgaggtcgcccaccgcgtcgccttcggg
tatggccaccttacttgggagtggaagcggggcctgcgaagttacctccacccgttgatc
tttgctgctctctacaagattctggcgctactccgcctggatactccatggtttatggtg
atggctccacggctcctgcaatctgtctttgcagcttttggagatctatacttgtataaa
ctttccaaacgtattttcagtgttcaggttgcccaatggacattattttcccagttggtt
aactggttcatgtttttttgcatcacacggactctatcaaacagcttggagacggttttg
actgtcgccgggcttcattattggtttaccgcaatagaatcttccaagggaacctcagtt
gtttcaaagcatcaagctgccagtaaacaaagtcatccatcaagaaaactggctcttctg
atagcagccttatcctgcgccattcggccaacaagtgctgtaacatggctttatgttggt
ctgttggattttattcagatgaaatgcaaatgtcgttttgtctttctcgaggtcattccg
gtaggggccattgtccttgcagtaacaacactccttgattggtggatgtatggttcccag
gtcatagtgccacttaattttttgaaattcaacctcttctcttcaggaggtgactactat
ggaacacatgtcttccactggtacttcacacagggttttccatccatgatttggacattc
ttaccattggcaatatgtggaattgtaaagtctcgagaatggaggatttcaggactaatc
acttgggtattaggggtttacagcatacttggacataaagaattcagatttgttcttccg
gtgctacctttagcattgatgttctcaggatactgcttagctgcaatgtcacaattcaag
ggaaaaaagctgcatgagaaaagatgtctttcgaggttgcagatttctgttattcttctc
atcataaccaatattccaatggccttctatatgttgttattccatcaaagaggaacagaa
gatgttatgtattatttgtcaaaagaagcccatgatggaagagtgaagagtgtcctcttc
ctcatgccttgtcattcaacaccttactattctaccttacattacaacatacctatgcgc
tttttggactgcactcctagtgatagcaaagggaccttggatgagtcagatcgtttcctt
acaagcccatctgagtttgtgggcgaggttttcggaaatttatcttcattcagtcacatt
gtattatttgagtccgaagaaagacatgttctccacttgcttctgcgcaattcttttctt
gaggtcaggagatatttccactcccatttcaaggttgacagagaccttcagtcgtctgtc
gttgtttattcacagagggatgtcttatga
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