Panicum virgatum (switchgrass): 120654421
Help
Entry
120654421 CDS
T07260
Name
(RefSeq) catalase isozyme 3
KO
K03781
catalase [EC:
1.11.1.6
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00380
Tryptophan metabolism
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir04016
MAPK signaling pathway - plant
pvir04146
Peroxisome
Module
pvir_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120654421
09105 Amino acid metabolism
00380 Tryptophan metabolism
120654421
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120654421
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120654421
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.11 Acting on a peroxide as acceptor
1.11.1 Peroxidases
1.11.1.6 catalase
120654421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Catalase
Catalase-rel
HdeA
Motif
Other DBs
NCBI-GeneID:
120654421
NCBI-ProteinID:
XP_039787879
LinkDB
All DBs
Position
1N:complement(1166645..1168783)
Genome browser
AA seq
493 aa
AA seq
DB search
MDPTKFRPSSAHDGGVTTTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIP
ERVVHARGASAKGFFECTHDVSDLTCADFLRAPGARTPVIVRFSTVIHERGSPETIRDPR
GFAVKFYTREGNWDLLGNNFPVFFIRDGIKFPDVIHAFKPNPRSHVQEYWRVFDFLSHHP
ESLHTFFFLFDDVGVPADYRHMEGFGVNTYTFVSAAGKASYVKFHWKPACGVRCILTDEE
AALVGGRNHSHATQDLYDSIAAGSFPEWQLLVQVMDPDTEDRYDFDPLDDTKTWPEDLLP
LRPVGRLVLDRNVDNFFNENEQLAFGPGLVVPGIYYSDDKMLQCRVFAYADTQRYRLGPN
YLMLPVNAPRCAHHNNHYDGAMNFMHRDEEVDYYPSRHAPLRQAPPVPVPARPLAGRREK
ATIRKPNDFQQPGERYRSWDADRQERFVRRFADSLGHPKVSQELRSIWIDLLSKCDASLG
KKIATRLNVKPSM
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaccaagttccggccgtcgagcgcgcacgacggcggcgtgacgacgacgaac
gccggcgcgccggtgtggaacgacaacgaggccctgacggtgggcccgcgcgggccgatc
ctgctggaggactaccacctgatcgagaaggtggcccacttcgcccgcgagcgcatcccg
gagcgcgtggtccacgcgcgcggcgcctccgccaagggcttcttcgagtgcacccacgac
gtgtcggacctcacctgcgccgacttcctccgcgcccccggcgcccgcacgccggtgatc
gtccgcttctccacggtgatccacgagcgcggcagcccggagacgatccgcgacccgcgc
gggttcgccgtcaagttctacacccgggagggcaactgggacctgctgggcaacaacttc
cccgtcttcttcatccgcgacggcatcaagttccccgacgtgatccacgccttcaagccc
aacccgcggtcgcacgtgcaggagtactggcgcgtcttcgacttcctctcgcaccacccg
gagagcctccacaccttcttcttcctcttcgacgacgtcggcgtgcccgccgactaccgc
cacatggagggcttcggcgtcaacacctacaccttcgtcagcgccgccggcaaggccagc
tacgtcaagttccactggaagcccgcctgcggggtgcgctgcatcctcaccgacgaggag
gcggcgctcgtcggcgggcgcaaccacagccacgcgacgcaggacctgtacgactccatc
gccgccggcagcttccccgagtggcagctgctggtgcaggtgatggacccggacacggag
gaccggtacgacttcgacccgctggacgacaccaagacgtggcccgaggacctgctcccg
ctgcggccggtggggcggctggtgctggaccggaacgtggacaacttcttcaacgagaac
gagcagctggccttcggccccgggctggtggtgcccgggatctactactcggacgacaag
atgctgcagtgccgggtgttcgcgtacgccgacacgcagcgctaccggctggggcccaac
tacctgatgctgcccgtgaacgcgccgcgctgcgcgcaccacaacaaccactacgacggc
gccatgaacttcatgcaccgggacgaggaggtggactactacccgtcgaggcacgcgccg
ctgcggcaggcgccgccggtgccggtgccggcgaggccgctggcggggaggagggagaag
gccaccatcaggaagcccaacgacttccagcagcccggggagaggtaccgctcgtgggac
gccgacaggcaggagaggttcgtcaggaggttcgccgactcgctgggacaccccaaggtc
agccaggagctcagatccatctggatcgacctgctctcaaagtgcgacgcgtcgctgggg
aagaagatcgccacccgcctcaacgtcaagccaagcatgtga
DBGET
integrated database retrieval system