Panicum virgatum (switchgrass): 120654438
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Entry
120654438 CDS
T07260
Name
(RefSeq) glutamate receptor 3.1-like isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120654438
Ion channels [BR:
pvir04040
]
Ligand-gated channels
Glutamate (ionotropic)
120654438
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
SBP_bac_3
Lig_chan-Glu_bd
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
120654438
NCBI-ProteinID:
XP_039787905
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All DBs
Position
1N:1302838..1308535
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AA seq
934 aa
AA seq
DB search
MKIVFLMLLLVSLFLFPNGVRKGLAARPSVVSVGSILRFNSTTGGVSAVAIHAALEDINS
DPTVLNGTTLQVDMRDTNCDDGFLGMVEALQFMETDVIAIIGPQCSTIAHIISYVANELQ
VPLMSFASDATLSSIQFPFFVRTMPSDLYEMAAVAAVVDYYQWKIVTAIYIDDDYGRNGI
AALDDELTARRCKISYKVGFPSNAKRSDLLNLLVTVSNMESRVIILHTGAEPGLKLLSLA
NGLNMMGNGYVWIGTDWLSSYLDANSSVPAETINGMQGVLTVRPHIPKSKMKSNLMSKWS
SLSKKYNHSDLRLSAYGFYVYDSVWAVARALDAFFDDGGRISFKNDSRLRDETGGSLHLE
AMSVFDMGKKLLDKIRQVNFTGASGQVQFNAQGELIHPAYDIISIIGNGVRTIGFWSNYT
RLLSTVLPEDLYLKPPNTSVANQHLYDVIWPGETAQKPRGWVFPSNAKELIIGVPNRFSF
KEFVTLDNATGKMTGYCIDVFTQALSLLPYPVTFRFQAFGTGTENPHYDQLVQKVADNEF
DAAIGDIVITMNRTQTLDFTQPFIESGLVILAPVKKHITNSWAFLQPFTLGMWCVTGLSF
LVVGAVIWVLEHRINDDFRGSPRQQLITIVWFSFSTLFFAHRENTMSTLGRGVLIIWLFV
VLIIQSSYTASLTSILTVQQLDTSIRGLDDLKNSDYPIGFQVGSFAEEYMVKELNISRSR
LKALGSPEEYAENLKLGPKKGGVMAIVDERPYVELFLSTNCKIAVAGSDFTSRGWGFAFP
RDSPLQIDLSTAILTLSENGELQRIHDKWLRTGDCSADNTEFVDSNQLRLESFMGLFLIC
GAACALALLIYFGIMLRQYLRHEPPDSISAEPGSSKSKHSIKRFFSFVDNREPPKQNRSL
HLSGSSMPTTPTSNVDIERPGRPIRNGGVVNIES
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtgtttctcatgttgttgcttgtctccctgttcctcttccctaatggggtc
cgcaagggcttagctgcaaggccttcagttgtgagtgttggttccattcttcggtttaac
tccaccactggaggtgtttcagcggttgccatccatgcggccttggaggatataaactct
gatccgacagttctaaatggaacaacattacaagttgacatgagggatacaaattgcgac
gatggtttcctcggaatggttgaagctttgcagttcatggagactgatgttattgcaatc
attgggccacaatgctctactattgctcatatcatttcgtatgtcgcaaatgagctccaa
gtacctttgatgtcctttgcatctgatgcaactctatcatcgatccagttccccttcttt
gtacggactatgcccagtgatctctacgaaatggcagctgtggcagcagttgttgattac
taccaatggaagatagtgactgccatatatattgatgatgattatggtcgaaacggcatt
gctgctttggatgatgaacttactgctaggcgctgcaaaatttcctacaaggttgggttt
ccctccaatgctaaaagaagtgaccttctaaatttgttggttaccgttagtaatatggag
tctcgtgttattatcctccatactggtgcggaacccggactcaagcttctctcacttgca
aacggactgaacatgatgggcaatggctatgtatggattggaactgattggctttcttct
tatcttgatgctaattcatcagttcctgctgaaactataaatggcatgcaaggtgttctg
actgtacgtccacacatccctaagtcaaagatgaagagtaatttgatgtccaagtggagc
agcttaagcaagaaatacaaccacagtgatcttcgcctaagtgcttatggtttttatgtt
tatgatagtgtgtgggcagtagctcgggccctggacgccttctttgatgatggtggaaga
atttcctttaaaaatgactcaaggttgcgtgatgaaactgggggaagtcttcaccttgaa
gccatgagtgtttttgacatgggaaaaaaattactggataagattagacaggtgaacttc
actggggcgtctggccaagtgcaatttaatgctcagggtgaactcattcatcctgcgtat
gacatcataagtataattggaaatggcgtgcggaccattggtttttggtcaaactataca
agattgctgtcgactgtccttccagaagacctatatttgaagcctcctaatacttctgtt
gccaatcaacatctctatgatgtcatttggcctggagagactgcacagaagcctcgaggt
tgggtctttccttccaatgccaaagagttgataattggcgttcccaacagatttagcttt
aaagagtttgtcaccctagataacgctactgggaaaatgacgggctattgcatcgatgtc
tttactcaagcattgtctttgcttccttacccagttacattcaggtttcaagcttttggc
actggtactgaaaatcctcattatgatcaactcgtacagaaggttgcggacaatgagttt
gatgcagcaataggggacattgtcattacaatgaacagaactcaaactcttgatttcacc
cagccctttattgaatcaggcctggttattttggctccggtcaaaaagcatataacgaat
tcctgggcattcttgcagccatttacattggggatgtggtgtgttacagggttgtctttt
cttgttgtgggtgcggttatttgggttcttgagcatcgaatcaatgatgatttccgtggc
tcaccacgacaacaattaataacaattgtttggttcagcttttcgactctattttttgca
catagagaaaacactatgagcaccttaggacgtggtgttctgatcatatggctatttgtt
gttttgatcattcaatccagctataccgcaagtcttacttccatcctaacggtgcaacaa
ctcgatacttctataagaggacttgatgacctgaaaaatagtgattaccctattggtttc
caagttggttcttttgcagaagaatacatggtcaaggaactcaacatctcacggtcaagg
ttaaaagctctcggttctcctgaagagtatgctgaaaacctcaagctaggccctaagaaa
ggaggtgttatggccattgtcgatgagcgcccatatgttgagctgtttttgtcaactaac
tgcaagattgctgtagctggctcagattttaccagtagaggatggggctttgcatttcca
agggattcccctctgcaaatagacctgtccaccgcaatcctaactttgtcggagaatggg
gaactgcagcggatccacgacaagtggctcaggacaggcgattgctcagctgacaatacc
gagtttgtggactcgaaccagctccgccttgagagcttcatgggcctgttcctcatttgt
ggtgcagcatgtgccctcgcactgctcatttacttcggcatcatgctacgccagtacctg
agacatgaaccgcctgattctatctccgcagagccagggtcatcaaaatcaaagcacagc
atcaaaagattcttctcattcgtcgataacagggagccaccaaagcaaaatcggtctttg
cacctttcagggagttcgatgccaacaacgccaactagtaatgttgacatagaaaggcca
gggaggccaatcagaaatggaggtgtcgttaatatagagagctag
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