KEGG   Panicum virgatum (switchgrass): 120654468
Entry
120654468         CDS       T07260                                 
Name
(RefSeq) glutamate--tRNA ligase, chloroplastic/mitochondrial-like
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00860  Porphyrin metabolism
pvir00970  Aminoacyl-tRNA biosynthesis
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01240  Biosynthesis of cofactors
Module
pvir_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    120654468
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    120654468
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pvir01007]
    120654468
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pvir03016]
    120654468
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pvir02048]
    120654468
Enzymes [BR:pvir01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     120654468
Amino acid related enzymes [BR:pvir01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   120654468
Transfer RNA biogenesis [BR:pvir03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    120654468
 Prokaryotic type
   Other AARSs
    120654468
Prokaryotic defense system [BR:pvir02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    120654468
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2
Other DBs
NCBI-GeneID: 120654468
NCBI-ProteinID: XP_039787936
LinkDB
Position
1N:complement(1694659..1699088)
AA seq 566 aa
MAATALLAGSPWLRLRLRPDAPARRPFARHIHLRRALSSRARASASASDPVRVRFAPSPT
GNLHVGGARTALFNYLFARSNGGRFVLRVEDTDLERSTRRSEEAVLADLAWLGLQWDEGP
DVGGEFGPYRQSERNSLYKEYAEKLLDSGAVYRCFCSNEELEQMKEFAKQRQLPPVYMGK
WATASDVEVEQELEKGTPYTYRFRVPKEGSLKINDLIRGEVSWNLDTLGDFVIMRSNGQP
VYNFCVTVDDATMQISHVIRAEEHLPNTLRQALIYKALGFPMPSFAHVSLILAPDKSKLS
KRHGATSVGQYKEMGYLPQAMVNYLALLGWGDGTENEFFTIDDLVEKFTINRVNKSGAVF
DAMKLKWMNGQHLRSFPTDELIKAFEDRWKDTGILQESESGFAKEAAELLKDGIDLITEA
DAALTNLLSYPLHATLSSDEAKPVVQDKISEVALGLISAYDSGELTQALAEGRDGWQKWV
KGFGKALKRKGKGLFMPLRVLLTGKLHGPDMGASIALIHKAGICGAVTPQSNFITLDERF
RILKEVDWESLVKEESPSESAIPAAS
NT seq 1701 nt   +upstreamnt  +downstreamnt
atggcggcgaccgcgctgctggcgggctcgccgtggctgcgcctccgcctccgcccggac
gcgcccgcgcgccgccccttcgcccgccacatccacctccgccgggccctctcctcccgc
gcccgcgcctccgcctccgcctccgaccccgtccgcgtccgcttcgcgccctcgcccacg
ggcaacctccacgtcggcggcgcccgcaccgcgctcttcaactacctcttcgcgcgctcc
aacggcggccgcttcgtgctccgcgtcgaggacaccgacctcgagcgctccaccaggagg
tccgaggaggccgtcctcgccgacctcgcgtggctcggcctccagtgggacgaaggtccg
gatgttggcggggagtttgggccctatcgccagtcagagcggaattcactgtacaaggag
tacgccgagaagcttttagactccggcgcagtttaccgctgcttttgctccaacgaggaa
cttgagcaaatgaaggaattcgcaaagcagaggcaacttcctcctgtgtacatgggcaag
tgggcaaccgcttcagacgttgaagtggagcaggagctagagaaagggacaccttacact
tatcggttccgtgtgccaaaggaagggtcgttgaaaattaatgaccttattcgtggcgag
gtcagttggaacctagacacgcttggtgactttgtgattatgagaagcaatggacaacct
gtgtataacttctgtgtgacagttgacgatgctaccatgcaaatctctcatgttattaga
gctgaagagcatttaccaaacacactgcggcaagctctaatttataaagctctcggattc
ccaatgccttcatttgcccatgtgtcacttattctggcacctgacaaaagcaaactgtcg
aaacgtcatggagctacttctgttgggcagtataaagagatgggctatctacctcaggca
atggtaaattatttagcactactgggctggggtgatgggactgaaaatgagttcttcact
attgatgatctagttgaaaaattcactatcaatcgtgtcaataaaagcggagcagtcttt
gatgcaatgaaattaaaatggatgaatggtcaacatctaagatcatttccaacagatgaa
ctcatcaaggcttttgaagatcggtggaaggacaccggcattctccaggagtctgaaagt
ggttttgcaaaggaagctgccgagcttttgaaggatggtattgatctgataacagaggct
gatgcagctcttacaaatttgttgtcatatccccttcacgctactttaagcagtgatgaa
gctaaacctgtggtgcaagacaagatttctgaggttgctttgggtcttatttctgcgtat
gatagcggtgaacttacacaagcactagctgagggccgtgatggttggcagaagtgggtg
aaaggttttggcaaggctctcaaaagaaagggcaaagggctgtttatgccgctccgagta
ctgttgacggggaagcttcatgggcctgacatgggtgccagcatagcccttatacataaa
gctggcatctgtggagcagtgacgcctcagtcgaatttcataactctagatgagcggttt
aggatcctcaaggaggttgactgggagtcgttggttaaggaggagtcgccttctgaatca
gccatccccgctgcttcatag

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