Panicum virgatum (switchgrass): 120654486
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Entry
120654486 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 46, chloroplastic-like
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120654486
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120654486
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GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
120654486
NCBI-ProteinID:
XP_039787961
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Position
1N:complement(1849303..1856732)
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AA seq
529 aa
AA seq
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MSAHLRLLSAAHSIPTPAPTRAPTSLHRLRQRLPAPPPAARLRLLRPPRLEESPRLSSAA
RCRCAGSAVAEDGGEQAAAGIWEQVRDIVVFAGPALGLWICGPLMSLIDTMVIGQTSALQ
LAALGPGTVFCDYLSYIFMFLSVATSNMVATSLAKKDEDLAQHQVSMLLFIALTCGIGMF
LFTKVFGTQALTAFAGSGNYEIISSANTYAQIRGFAWPAVLVGLVAQSASLGMKDSWGPL
KALAAATVVNGVGDIFLCSVCGFGIAGAAWATMVSQVIAAFMMMQNLNNKGFRAFSFTIP
SARELLQIFEIAAPVFVTMTSKVAFYALLTYSATSMGAVTLAAHQVMINILCMCTVWGEP
LSQTAQSFMPELIYGANRNLIKARMLLKSLVIIGVITGAVLGAVGTLVPWLFPSLFTNDR
MVIQQMHRVLAPYFSVLLVTPSVHSLEGTLLAGRDLRYLSQSMGVCFCIGTLLLMVLRNK
FGSLPGCWWILVLFQWSRFASGLQRLISPTGMLYNENFNQADYIKTKAT
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcaccttcgcctcctctccgccgcccactccatccccacccccgcacccacc
cgcgcgcccacttccctccaccgcctccgccaacgcctccctgctcctcctcccgcggcc
cgcctcaggctgctccggccgccgcggctcgaggagagcccgcgcctctccagcgccgca
cgctgccgctgcgccggctcggcggtcgccgaggacggcggcgagcaggcggcggcgggg
atatgggagcaggtgcgggacatcgtcgtgttcgcaggccccgcgctggggctctggatc
tgcggcccgctcatgagcctcatcgacaccatggtcatcggccagacctccgccctccag
ctcgccgcactagggcctgggacagtgttctgcgactacctaagctacatattcatgttc
ctttcggttgcaacctctaacatggtggccacctccttagctaaaaaggacgaagacctt
gcacaacatcaagtatctatgttgctgtttattgctcttacgtgtggcataggaatgttt
ttgttcaccaaggtttttggtactcaagcattgactgcttttgctggatcagggaattat
gaaattatctcttcggccaatacatatgcacagataagaggctttgcatggcctgcagtt
cttgtgggcttagttgctcaaagtgccagtctgggcatgaaggattcttggggtcctttg
aaagcattggcagctgctactgtggtaaatggtgttggtgatatatttctttgctctgtt
tgtggttttggaattgctggtgcggcctgggcaactatggtttcacaggttattgcagcg
ttcatgatgatgcagaatctaaacaataagggttttcgagctttctcatttacgattcca
tcagcgagagagctgctgcagatatttgaaattgcagctcctgttttcgtgacaatgaca
tccaaggtagcattttatgcattgctcacatattcagcgacttctatgggagcagtaact
cttgcagcgcatcaggttatgattaacatcttatgcatgtgtactgtttggggtgagcct
ttgtcacaaactgcacagtcattcatgccggagctgatatatggtgctaatcgtaatttg
atcaaggcaaggatgctattgaagtcacttgtgatcattggagtgattactggagcggtt
ttgggggcagtagggacacttgttccatggcttttccctagtctctttaccaatgacaga
atggtcatccaacagatgcacagagtactggctccatatttcagtgtgttgctggtgact
ccttcagtacactcccttgaaggaacattattggctggaagggatctgcgatatttgagt
caatcaatgggtgtatgcttttgcattggaacccttctattgatggttctccgcaacaaa
tttggtagcttgccaggatgctggtggatactcgtcttgtttcagtggagtcggtttgca
agtggtttacaacggctcatttctccaacgggcatgttgtacaatgaaaattttaaccag
gctgactatatcaaaacgaaggccacgtga
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