Panicum virgatum (switchgrass): 120654539
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Entry
120654539 CDS
T07260
Name
(RefSeq) transcription factor HBP-1a-like isoform X1
KO
K09060
plant G-box-binding factor
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120654539
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120654539
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFMR
MFMR_assoc
bZIP_1
bZIP_2
Rab11-FIP3
bZIP_Maf
HALZ
CCD48
DUF6779
CC_Bre1
CENP-F_leu_zip
DivIVA
CENPH
NET2A_C
Seadorna_VP6
UPF0242
DUF3450
FapA
Shugoshin_N
Motif
Other DBs
NCBI-GeneID:
120654539
NCBI-ProteinID:
XP_039788039
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All DBs
Position
1N:2607479..2611852
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AA seq
352 aa
AA seq
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MGSNDPSTQAPKASEQDQPSATTSGATASVYPEWPSFQAYSAIPPHGFFPPTVAANPQAH
PYMWGAQPMVPPYGTPPSPYVMYPPGTVYAHPSTPPGMHPFSHYPMPTNGHAETPGAAPS
ASEMNGKNEPGRMSAPSANGITSHSESGSESESEGSDANSQNDSHSKDNDGKEDGSSQNS
ISYSASQGMLNQTMPMIPIQPGAMVGVPGSTANLNIGMDYWAAPGSATVPATQGKATSGS
ARGDQWDERELKKQKRKQSNRESARRSRLRKQAECEELGQRAESLRSENSSLRAELERIR
KEYEQLLSQNASLKEKLGATSDSIPDMNEQNDGGGSGYKKQPDSDAQPGNES
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcaatgaccctagcacacaggctccaaaggcatcagaacaagatcaaccttca
gccactacatccggggcaacagcttcagtttaccctgagtggcccagctttcaggcctac
tcagcaattccaccacatggattctttccccctaccgtcgctgcaaatccacaggctcat
ccatacatgtggggagctcagcccatggtgccaccgtacgggacgccgccatcaccttat
gtgatgtatccacctggaacagtatatgcccatccctctacaccacctggtatgcatcca
tttagtcattatcctatgccaacaaatggacatgctgaaactcctggagctgcgccaagt
gcttcagaaatgaacggaaaaaatgagcctggcagaatgtctgctccatctgccaatggg
attacctcccacagtgagagtggaagtgagagtgagagtgaaggaagtgacgccaattcc
caaaatgattcacactcaaaggacaatgatggaaaggaagacggcagttctcagaacagc
atatcttattcagcatcacagggaatgttaaatcaaaccatgccgatgattccaatacaa
ccgggtgcgatggttggagttccaggttccacagctaacttgaatattggaatggactac
tgggccgctcctggttctgcaactgtccctgcaacacagggcaaagcaacttctggttca
gcacgaggagatcaatgggacgaaagggaactcaagaagcagaaacgaaagcaatctaat
cgagaatcagcacgcaggtcccggctgcgcaagcaggctgagtgcgaggagcttgggcaa
cgtgctgaatctttaaggtcagaaaactcctctcttagagctgagcttgaacggattaga
aaggagtacgaacagttactttcgcagaatgcttccctcaaggaaaagctgggggcaacc
agtgattctattcctgacatgaatgagcagaacgacggcggtggcagcggctacaagaag
cagcctgattccgatgcccagcctgggaacgagtcttga
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