Panicum virgatum (switchgrass): 120654619
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Entry
120654619 CDS
T07260
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 6-like
KO
K19893
glucan endo-1,3-beta-glucosidase 5/6 [EC:
3.2.1.39
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120654619
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
120654619
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
120654619
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pvir00537
]
Enzymes
120654619
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
Motif
Other DBs
NCBI-GeneID:
120654619
NCBI-ProteinID:
XP_039788128
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All DBs
Position
1N:3398464..3402432
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AA seq
489 aa
AA seq
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MGSGSGHGAAAVAVALVSWLCFASAGVGAIGANWGTQTSHPLPPDTVVRMLKDNRFQKVK
LFDAEEGTMNALKKSGLEVMVGIPNDMLLTMATNMKSAEKWVDTNVSSYLNDGVNIRYVA
VGNEPFLETYNGSFLQTTYPAIRNIQSALIKAGLGNQVKVTCPLNADVYASPTTKPSDGD
FRTDIHDLMIAIVKLLSDNGGAFTVNIYPFISLYIDPNFPMDYAFFEGASSPIVDGSITY
TNMFDANHDTLIWALKKNGYGNLPVIVGEIGWPTDGDRNANPQMAQRFNQGFMTHIASGR
GTPMRPGPVDAYLFSLIDEDEKSIQPGNFERHWGIFTYDGLPKYQLNFGTANSGGLVKAK
GMKYLERKWCVLKPSVSLNNPNLADNVGYACSMADCTSLGYKTSCGMLNLGGNVSYAFNN
YYQKNDQDDVACGFQGLATTTGQDPSTGTCRFGIMIEVDSAFSLRLQRLGSNFLLMLLLV
LLQLCLSFS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgggttccgggtccggccatggagcggcggcggtggccgtggcgctggtttcttggctg
tgcttcgcatcggcaggcgtcggcgcgataggagcgaactggggcacgcagacgagccac
ccgctgccgccggacacggtggtgcggatgctcaaggacaaccggttccagaaggtgaag
ctgttcgacgccgaggagggcaccatgaacgccctcaagaagagcgggctggaagtgatg
gtcggcatccccaacgacatgctgctgacgatggccaccaacatgaagtctgccgagaag
tgggtcgacacgaacgtctccagctacctcaatgacggcgtcaacatcaggtacgttgca
gttgggaatgagccgtttttggagacatacaatggaagctttctgcaaaccacttatcct
gccatcagaaacatacaaagtgcacttataaaggctggtttgggcaatcaagttaaagtc
acatgccctctgaatgccgatgtctatgcatcaccaaccaccaagccttctgatggggac
ttccgcacggatattcatgatctgatgatcgctattgtaaaattgctcagcgacaatggt
ggagcttttactgtcaacatataccctttcataagcctctacattgatccaaacttccct
atggattatgccttctttgagggggcctcgtcacccattgttgatggttccattacttac
acaaacatgttcgatgcgaaccatgacacacttatatgggctctgaaaaagaatggctat
ggaaacctcccagtcattgttggggagatcggatggcctactgatggggacaggaatgct
aatcctcagatggctcagcgcttcaaccaaggcttcatgactcatattgcctctggtcga
ggaacgccgatgcggcctggacctgttgatgcttacttgttcagtctaattgatgaggac
gagaagagcatccaaccaggaaattttgagcggcactggggtatctttacttatgacggc
ctgccaaaataccaactgaatttcgggacagcaaattcaggcggccttgtgaaagcaaag
ggcatgaagtacctcgaaagaaagtggtgtgtactgaagccttcggtgagcctcaacaat
ccgaatctcgcagacaatgtgggctatgcgtgttccatggcagactgcaccagccttggt
tacaagacttcgtgcgggatgctgaacttaggtggcaacgtctcatatgcattcaacaac
tactaccagaagaatgaccaagatgatgtcgcctgtgggtttcaaggccttgcgacaaca
actggccaagaccccagcactgggacatgcagatttggtatcatgattgaggtcgactcc
gccttctcattgcgtctgcagcggcttggaagcaacttcctcttgatgctcctgcttgtg
cttctccagctatgcctgtcattctcataa
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