Panicum virgatum (switchgrass): 120654640
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Entry
120654640 CDS
T07260
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 2 homolog A-like isoform X1
KO
K03028
26S proteasome regulatory subunit N1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120654640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120654640
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
120654640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN1_RPN2_N
RPN1_C
PC_rep
HEAT_2
Motif
Other DBs
NCBI-GeneID:
120654640
NCBI-ProteinID:
XP_039788158
LinkDB
All DBs
Position
1N:3667465..3674565
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AA seq
889 aa
AA seq
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MAPPEHPTPTAPSEHSQPPPPAVAKGKGKKKDDDDLSEEDQALKDQLDLYVLRSQDADPG
VQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKSYFETMPESELKKYMADILSVL
ALTMSIEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEFQKRQDDDLPIDALMELV
QQIISFHMKHNAEPEAVDLLMEVEDLDLLVEHVDTTNYKRACLYLTSSSKYLPAPDDMLA
LDIAYTIYMKFGDLASALRIALQLEKPMQYVKQVYTSTDDFLLKKQFSYIIARHGLAMEI
DDEIAADDNDKEVLQEIVNNTKLSEGYLTLARDIEVMEPKSPEDIYKVHLIDGRGASSSL
DSARQNLAATFVNAFVNAGFGQDKLMTAPSDSSSSGSSGNWLFKNKEHGKASAAASLGMI
LLWDTDSGLAQLDKYLHSNDTHVVAGALLGIGIVTCGVKNDCDPALAILMEYIGKDDSNI
RIGAILGLGIAYAGSQKEELKMHLSAVLGDSQSPLEVLVFSAIALGLVFVGSCNEEIAQS
IIFALMERSEAELAEPIIRLLPVALGLLYLGKQESVEATAEVSKTFDEKIGKYCDVTLMS
LAYAGTGNVLKVQKLLGICSQHLEKGETHQGPAVLGIALIAMAEELGAEMAVRSLERLLQ
YGEQNIRRAVPLALGILCISNPKVNVMDTLSRLSHDADADVSMAAIISLGLIGAGTNNAR
IAGMLRNLSSYYYKEAAHLFCVRIAQGLVHLGKGLLTLSPYHSDRFLLSPMALGGLVTVL
HACLDMKSTILGKYHYILYIIVLAMQPRMLLTVDEDLKPLSVPVRVGQAVDVVGQAGRPK
TITGFQTHSTPVLLAAGERAELATEKYIPLTPVLEGFVILKKNPEYHEE
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccggagcatcccacccccaccgcgccgtcggagcactcgcagcctccgccg
ccggcggtggctaaggggaaggggaagaagaaggatgacgacgatctgtcggaggaggat
caggcgcttaaggaccagctggacctgtacgtcctgcggtcgcaggacgcggatcccggt
gtgcagaagctcgccctcgagagcatgaggcaggagattcgttctgccacaagctcaatg
acttctgttccgaagccgctgaaatttctccgcccacactatggaaccctcaagtcctac
tttgagaccatgccagaatctgaattgaagaaatacatggcggacatactgtcggtgtta
gctttgacaatgtccattgaaggagaaagggagtccctgaaatatcgtttattgggctct
gaaggagacatcggttcatggggtcatgaatatgtaagaaatttggctggcgagattgca
caagagtttcaaaagcgtcaggatgatgacttgcccattgatgccctaatggagcttgtg
cagcaaattatttcattccacatgaagcataatgctgaacctgaagctgtagatcttctg
atggaggttgaagaccttgatttgctagttgagcacgtggacactacaaattacaaaaga
gcttgcttgtatcttactagttcgtccaaataccttcctgctcctgacgatatgttggca
cttgacatagcatataccatctacatgaagtttggagaccttgcaagcgctttgagaatt
gctctgcaacttgaaaaacccatgcagtatgtgaagcaagtctacacatcaactgatgat
tttctgctcaagaaacaattctcatacatcatagcacgacatggtctggctatggagatt
gatgatgagatagctgctgatgacaatgacaaggaggttttgcaagaaatagttaataat
actaagctgagtgagggataccttactcttgctcgtgatattgaggtcatggagccaaaa
tctcctgaggatatatacaaggtccatttgattgatggccgtggtgccagctccagtctt
gattctgcaagacagaatttggctgcaacatttgtcaatgcatttgtgaatgctgggttt
ggccaggacaagttgatgaccgctccatctgattcgtccagcagtgggtcttctggaaac
tggttgttcaagaacaaggaacacggaaaagccagtgcagcagctagtctgggaatgatt
cttctgtgggatactgattccgggcttgctcagcttgacaaatacttgcatagtaatgac
actcatgttgttgctggagcgttgctaggtattggaattgtcacgtgcggtgtgaagaat
gattgtgatcctgctcttgctattctcatggagtatattggaaaggatgactcgaacatt
cgtatcggtgcaatattgggtcttggtattgcatatgctggttcccagaaagaagagctt
aaaatgcatctttctgctgtgttgggagactcccaatcacctcttgaggtcttggtcttc
tcagccattgccttgggattggtgtttgtcggttcttgcaatgaagagattgcacagtct
atcatatttgccttgatggagcgtagtgaggctgaattggcagagcccattataaggttg
cttcccgttgcgcttggccttctatatcttgggaaacaggaaagtgtagaggctactgcg
gaggtctctaaaacttttgatgagaagatagggaagtactgtgatgtaacgcttatgtca
ttggcatatgcggggacagggaatgtgcttaaggttcagaaacttcttggcatttgctca
cagcatcttgagaaaggcgaaacacaccaagggccagctgtccttggcattgctcttatt
gctatggctgaagaattaggagctgaaatggccgtgcgctcacttgagcgtcttttgcag
tatggcgagcagaatattaggcgggcagttcctcttgctcttggtatactctgtatatct
aatcccaaggtaaatgtgatggacacattgagcagattgagtcatgatgcagatgctgat
gtgtcaatggctgcaatcatctcattgggtttgattggtgctgggacgaacaatgccaga
atagctggcatgcttcgcaacctttcaagttattactacaaagaagctgctcacctattt
tgtgtaagaattgctcagggtcttgttcaccttggaaagggcttgttgaccctttctcca
taccattctgatcgatttcttctttccccgatggcgcttggggggcttgtcactgttctg
catgcctgccttgatatgaagtccacaatcctagggaaatatcactacatcctttacatt
attgtcctggcaatgcagccgaggatgcttttgacggtggatgaggatctgaagcccctt
tctgttccagttcgagttgggcaagctgtcgatgttgttggtcaggcaggaaggcccaaa
acaattacaggcttccagacacattccacacctgtcttgcttgcagctggggagcgtgct
gaactagctactgaaaaatacattccactgacaccagtactcgagggctttgtaattctc
aagaaaaacccagaatatcacgaggagtga
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